RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 J3QR06 171 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 RRP9O43818 475 aaKnown RBP8.5□□□□□ -1.05
DDX41-216ENST00000513562 CCDC22O60826 627 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 OR2H2O95918 312 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 CSN2P05814 226 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 PRKACAP17612 351 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 BCL3P20749 454 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 NFYBP25208 207 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 FUT6P51993 359 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 RUNX1Q01196 453 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 ZNF616Q08AN1 781 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 Q8N6K4 173 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 Q8N9W7 124 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 OR1N2Q8NGR9 330 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 COQ2Q96H96 371 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 TTTY10Q9BZA0 68 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 EXOSC4Q9NPD3 245 aaKnown RBP8.5□□□□□ -1.05
DDX41-216ENST00000513562 IKZF2Q9UKS7 526 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 GTF2A1LQ9UNN4 478 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 SAMHD1Q9Y3Z3 626 aaKnown RBP8.5□□□□□ -1.05
DDX41-216ENST00000513562 TMEM14AQ9Y6G1 99 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 R4GMQ9 66 aa8.5□□□□□ -1.05
DDX41-216ENST00000513562 KBTBD11-OT1A0A1B0GTJ5 212 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 NCBP2LA6PVI3 153 aaKnown RBP8.49□□□□□ -1.05
DDX41-216ENST00000513562 A8MZ25 164 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 OVOL1O14753 267 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 SAP30O75446 220 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 GATBO75879 557 aaKnown RBP8.49□□□□□ -1.05
DDX41-216ENST00000513562 MRPL3P09001 348 aaKnown RBP8.49□□□□□ -1.05
DDX41-216ENST00000513562 IGHV4-30-4P0DP06 118 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 CALCBP10092 127 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 VDAC1P21796 283 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 MYF6P23409 242 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 POU3F4P49335 361 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 SNU13P55769 128 aaKnown RBP8.49□□□□□ -1.05
DDX41-216ENST00000513562 APOFQ13790 326 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 KIAA0141Q14154 515 aaPredicted RBP8.49□□□□□ -1.05
DDX41-216ENST00000513562 GINS1Q14691 196 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 LHFPL2Q6ZUX7 228 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 IZUMO1Q8IYV9 350 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 OR10G2Q8NGC3 310 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 CMTM5Q96DZ9 223 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 BORCS8Q96FH0 119 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 EAF1Q96JC9 268 aaPredicted RBP8.49□□□□□ -1.05
DDX41-216ENST00000513562 UBE2E2Q96LR5 201 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 SPATA25Q9BR10 227 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 CHST5Q9GZS9 411 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 GNB4Q9HAV0 340 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 PLEKHA1Q9HB21 404 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 HMG20AQ9NP66 347 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 C19orf73Q9NVV2 129 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 ZNF580Q9UK33 172 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 DSCAML1Q8TD84 2053 aa8.49□□□□□ -1.05
DDX41-216ENST00000513562 SH2D1BO14796 132 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 MPZL2O60487 215 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 IGF1P05019 195 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 HMGN1P05114 100 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 CGB3P0DN86 165 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 CGB7P0DN87 165 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 GNB1P62873 340 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 ZNF816Q0VGE8 651 aaPredicted RBP8.48□□□□□ -1.05
DDX41-216ENST00000513562 SRSF7Q16629 238 aaKnown RBP eCLIP8.48□□□□□ -1.05
DDX41-216ENST00000513562 KRBOX4Q5JUW0 171 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 PLEKHG7Q6ZR37 379 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 LYPD6Q86Y78 171 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 OR6Q1Q8NGQ2 317 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 HAVCR2Q8TDQ0 301 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 DCUN1D4Q92564 292 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 LEAP2Q969E1 77 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 KCTD7Q96MP8 289 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 FEVQ99581 238 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 APOL4Q9BPW4 351 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 HSPB9Q9BQS6 159 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 COMMD4Q9H0A8 199 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 PPIL3Q9H2H8 161 aaKnown RBP8.48□□□□□ -1.05
DDX41-216ENST00000513562 CCDC134Q9H6E4 229 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 LINC00574Q9H8X3 128 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 REEP1Q9H902 201 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 PLSCR3Q9NRY6 295 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 OR6C3Q9NZP0 311 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 PSG11Q9UQ72 335 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 SNX5Q9Y5X3 404 aa8.48□□□□□ -1.05
DDX41-216ENST00000513562 IGHV1-3A0A0C4DH29 117 aa8.47□□□□□ -1.05
DDX41-216ENST00000513562 RBMY1BA6NDE4 496 aaKnown RBP8.47□□□□□ -1.05
DDX41-216ENST00000513562 RBMY1EA6NEQ0 496 aaKnown RBP8.47□□□□□ -1.05
DDX41-216ENST00000513562 CCDC182A6NF36 153 aa8.47□□□□□ -1.05
DDX41-216ENST00000513562 HSD17B6O14756 317 aa8.47□□□□□ -1.05
DDX41-216ENST00000513562 SASH3O75995 380 aa8.47□□□□□ -1.05
DDX41-216ENST00000513562 CYB5AP00167 134 aa8.47□□□□□ -1.05
DDX41-216ENST00000513562 IGHV3-7P01780 117 aa8.47□□□□□ -1.05
DDX41-216ENST00000513562 RBMY1DP0C7P1 496 aaKnown RBP8.47□□□□□ -1.05
DDX41-216ENST00000513562 OR5H8P0DN80 308 aa8.47□□□□□ -1.05
DDX41-216ENST00000513562 RBP2P50120 134 aa8.47□□□□□ -1.05
DDX41-216ENST00000513562 CDK5Q00535 292 aa8.47□□□□□ -1.05
DDX41-216ENST00000513562 GABPB1Q06547 395 aaPredicted RBP8.47□□□□□ -1.05
DDX41-216ENST00000513562 OR2T5Q6IEZ7 315 aa8.47□□□□□ -1.05
DDX41-216ENST00000513562 ZNF322Q6U7Q0 402 aaPredicted RBP8.47□□□□□ -1.05
DDX41-216ENST00000513562 Q8N1Y9 231 aa8.47□□□□□ -1.05
DDX41-216ENST00000513562 ZNF491Q8N8L2 437 aa8.47□□□□□ -1.05
DDX41-216ENST00000513562 DNAAF1Q8NEP3 725 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms