RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 FAM206AQ9NX38 181 aa11.06□□□□□ -0.64
SPCS3-204ENST00000513139 HUWE1Q7Z6Z7 4374 aaKnown RBP11.05□□□□□ -0.64
SPCS3-204ENST00000513139 SRSF10O75494 262 aaKnown RBP11.05□□□□□ -0.64
SPCS3-204ENST00000513139 SULT1C4O75897 302 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 OR2F2O95006 317 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 PIPP12273 146 aaPredicted RBP11.05□□□□□ -0.64
SPCS3-204ENST00000513139 DCKP27707 260 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 BRS3P32247 399 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 ACTA2P62736 377 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 RPL23AP62750 156 aaKnown RBP11.05□□□□□ -0.64
SPCS3-204ENST00000513139 ACTG2P63267 376 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 DMRTC1Q5HYR2 192 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 CEP78Q5JTW2 689 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 Q8NFD4 153 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 OR8B12Q8NGG6 310 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 C4orf36Q96KX1 117 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 RBM14Q96PK6 669 aaKnown RBP11.05□□□□□ -0.64
SPCS3-204ENST00000513139 SLC25A33Q9BSK2 321 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 NIPAL2Q9H841 368 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 ZFP57Q9NU63 452 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 SCN3BQ9NY72 215 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 CNOT2Q9NZN8 540 aaKnown RBP11.05□□□□□ -0.64
SPCS3-204ENST00000513139 DIMT1Q9UNQ2 313 aaKnown RBP11.05□□□□□ -0.64
SPCS3-204ENST00000513139 LRRC42Q9Y546 428 aa11.05□□□□□ -0.64
SPCS3-204ENST00000513139 IGHV2-26A0A0B4J1V2 119 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 A0A0U1RQV5 110 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 IRGMA1A4Y4 181 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 PSMB11A5LHX3 300 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 E9PI62 339 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 M0QZK8 103 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 NXPH2O95156 264 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 AMY1AP04745 511 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 AMY2AP04746 511 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 RPLP1P05386 114 aaKnown RBP11.04□□□□□ -0.64
SPCS3-204ENST00000513139 ATP6V1B1P15313 513 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 CRHBPP24387 322 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 HTR1DP28221 377 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 CHATP28329 748 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 ARHGDIBP52566 201 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 MEF2CQ06413 473 aaPredicted RBP11.04□□□□□ -0.64
SPCS3-204ENST00000513139 OR2G6Q5TZ20 316 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 STX19Q8N4C7 294 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 PELI1Q96FA3 418 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 ZNF714Q96N38 554 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 NRIP2Q9BQI9 281 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 JAM3Q9BX67 310 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 CLEC7AQ9BXN2 247 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 PBOV1Q9GZY1 135 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 HES4Q9HCC6 221 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 GTF2A1LQ9UNN4 478 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 SLC22A13Q9Y226 551 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 POLDIP2Q9Y2S7 368 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 R4GMQ9 66 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 CSMD3Q7Z407 3707 aa11.04□□□□□ -0.64
SPCS3-204ENST00000513139 LOC110117498-PIK3R3F6TDL0 507 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 J3QT63 122 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 CDK1P06493 297 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 MYL12AP19105 171 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 MED21Q13503 144 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 ODF4Q2M2E3 257 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 ZNF829Q3KNS6 432 aaPredicted RBP11.03□□□□□ -0.64
SPCS3-204ENST00000513139 GDPD3Q7L5L3 318 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 OR2W3Q7Z3T1 314 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 KCTD20Q7Z5Y7 419 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 ZNF573Q86YE8 665 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 PRSS35Q8N3Z0 413 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 ZNF488Q96MN9 340 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 TMEM133Q9H2Q1 129 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 DUSP21Q9H596 190 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 OR52A1Q9UKL2 312 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 EXOSC1Q9Y3B2 195 aaKnown RBP11.03□□□□□ -0.64
SPCS3-204ENST00000513139 TPRKBQ9Y3C4 175 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 SESN1Q9Y6P5 492 aa11.03□□□□□ -0.64
SPCS3-204ENST00000513139 ACOD1A6NK06 481 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 H3BSH0 61 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 ZNF737O75373 536 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 TTRP02766 147 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 LYL1P12980 280 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 HAAOP46952 286 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 GTF2A1P52655 376 aaPredicted RBP11.02□□□□□ -0.65
SPCS3-204ENST00000513139 EDDM3BP56851 147 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 NANOS3P60323 173 aaKnown RBP11.02□□□□□ -0.65
SPCS3-204ENST00000513139 RIPPLY1Q0D2K3 151 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 RBM48Q5RL73 367 aaKnown RBP11.02□□□□□ -0.65
SPCS3-204ENST00000513139 BCL2L15Q5TBC7 163 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 PLCXD3Q63HM9 321 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 C8orf86Q6ZUL3 223 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 MOB3CQ70IA8 216 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 FAM220AQ7Z4H9 259 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 CATSPERDQ86XM0 798 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 RDH10Q8IZV5 341 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 ZNF676Q8N7Q3 588 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 ASCC1Q8N9N2 400 aaKnown RBP11.02□□□□□ -0.65
SPCS3-204ENST00000513139 OR4P4Q8NGL7 312 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 OR51E1Q8TCB6 317 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 MRPL48Q96GC5 212 aaKnown RBP11.02□□□□□ -0.65
SPCS3-204ENST00000513139 ASCL2Q99929 193 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 CHCHD3Q9NX63 227 aaKnown RBP11.02□□□□□ -0.65
SPCS3-204ENST00000513139 DPM3Q9P2X0 92 aa11.02□□□□□ -0.65
SPCS3-204ENST00000513139 OR14J1Q9UGF5 321 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms