RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 A0A1B0GVG6 124 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 FAM240AA0A1B0GVK7 77 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 SLC5A10A0PJK1 596 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 ARRDC5A6NEK1 342 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 LRRIQ4A6NIV6 560 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 ARGFXA6NJG6 315 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 RNASEK-C17orf49H0YIS7 233 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 H3BN98 237 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 J3QQQ9 107 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 TOR1AO14656 332 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 GYG2O15488 501 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 IGKV2D-40P01614 121 aaPredicted RBP0.14□□□□□ -2.39
PDGFC-208ENST00000512711 CRYGDP07320 174 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 PSKH1P11801 424 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 MSR1P21757 451 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 ELK4P28324 431 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 GABRR2P28476 465 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 EVI2BP34910 448 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 XKP51811 444 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 HCCSP53701 268 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 CLDN6P56747 220 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 TAS2R39P59534 338 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 RPL26P61254 145 aaKnown RBP0.14□□□□□ -2.39
PDGFC-208ENST00000512711 HMGN5P82970 282 aaKnown RBP0.14□□□□□ -2.39
PDGFC-208ENST00000512711 IRF8Q02556 426 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 RAD51Q06609 339 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 BNIP2Q12982 314 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 HTR4Q13639 388 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 IDI1Q13907 227 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 RCN1Q15293 331 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 TPRXLQ17RH7 258 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 KRTAP21-1Q3LI58 79 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 ACTBL2Q562R1 376 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 BEX5Q5H9J7 111 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 CLLU1OSQ5K130 101 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 ELP2Q6IA86 826 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 TMEM220Q6QAJ8 160 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 EPGNQ6UW88 154 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 UGT2A3Q6UWM9 527 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 FAM122BQ7Z309 247 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 GALNT10Q86SR1 603 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 MARCH3Q86UD3 253 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 APRG1Q8IVJ8 170 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 PQLC3Q8N755 202 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 FER1L6-AS1Q8NA97 138 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 CCDC148Q8NFR7 591 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 OR2M3Q8NG83 312 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 ERMNQ8TAM6 284 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 NT5CQ8TCD5 201 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 PDCD6IPQ8WUM4 868 aaKnown RBP0.14□□□□□ -2.39
PDGFC-208ENST00000512711 ISOC2Q96AB3 205 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 LINC01587Q99440 93 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 C20orf144Q9BQM9 153 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 ANP32EQ9BTT0 268 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 TSGA10Q9BZW7 698 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 DEFB129Q9H1M3 183 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 SLC38A1Q9H2H9 487 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 VPS37BQ9H9H4 285 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 CD209Q9NNX6 404 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 DDX18Q9NVP1 670 aaKnown RBP0.14□□□□□ -2.39
PDGFC-208ENST00000512711 RBM12B-AS1Q9P1G2 102 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 PSORS1C2Q9UIG4 136 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 RPUSD1Q9UJJ7 312 aaKnown RBP0.14□□□□□ -2.39
PDGFC-208ENST00000512711 FBXL3Q9UKT7 428 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 RPL26L1Q9UNX3 145 aaKnown RBP0.14□□□□□ -2.39
PDGFC-208ENST00000512711 SLC22A14Q9Y267 594 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 NEBP20929 6669 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 NAV2Q8IVL1 2488 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 KIAA2026Q5HYC2 2103 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 YLPM1P49750 1951 aaKnown RBP0.14□□□□□ -2.39
PDGFC-208ENST00000512711 BAZ2BQ9UIF8 2168 aaKnown RBP0.13□□□□□ -2.39
PDGFC-208ENST00000512711 USP42Q9H9J4 1324 aaKnown RBP0.13□□□□□ -2.39
PDGFC-208ENST00000512711 IGHV1-45A0A0A0MS14 117 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 MUC21A0A0G2JKD1 596 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 MUC21A0A140T8X8 626 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 OR2AT4A6NND4 320 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 CD300LBA8K4G0 201 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 A8MWP6 167 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 H3BP45 60 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 UPK2O00526 184 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 TCAPO15273 167 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 DNAJB6O75190 326 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 ERLIN1O75477 346 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 SOD1P00441 154 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 OR4A8P0C604 315 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 RALBP11234 206 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 CD36P16671 472 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 PMCHP20382 165 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 M6PRP20645 277 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 PRTN3P24158 256 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 CNTFRP26992 372 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 SPAM1P38567 509 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 RWDD2BP57060 319 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 SKP2Q13309 424 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 ZBTB6Q15916 424 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 UAP1Q16222 522 aaPredicted RBP0.13□□□□□ -2.39
PDGFC-208ENST00000512711 Q499Y3 187 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 FAM229BQ4G0N7 80 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 TPRG1LQ5T0D9 272 aa0.13□□□□□ -2.39
PDGFC-208ENST00000512711 IDNKQ5T6J7 187 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms