RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 C12orf10Q9HB07 376 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 ACER3Q9NUN7 267 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 TECRQ9NZ01 308 aaKnown RBP7.9□□□□□ -1.15
VCAN-208ENST00000512590 NAT8BQ9UHF3 227 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 TINAGQ9UJW2 476 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 LOC102724200A0A096LPH7 203 aaPredicted RBP7.9□□□□□ -1.15
VCAN-208ENST00000512590 MGMTP16455 207 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 DLX6P56179 175 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 PRNTQ86SH4 94 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 MS4A6EQ96DS6 147 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 VN1R1Q9GZP7 353 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 C20orf141Q9NUB4 165 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 PRNDQ9UKY0 176 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 DEPDC5O75140 1603 aa7.9□□□□□ -1.15
VCAN-208ENST00000512590 PREX1Q8TCU6 1659 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 A0A0G2JLM5 398 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 CBY3A6NI87 242 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 CTDSP2O14595 271 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 BGLAPP02818 100 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 LIFP15018 202 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 BTF3P20290 206 aaKnown RBP7.89□□□□□ -1.15
VCAN-208ENST00000512590 NKG7Q16617 165 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 FAM209AQ5JX71 171 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 ISCA2Q86U28 154 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 C4orf32Q8N8J7 132 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 DLX4Q92988 240 aaPredicted RBP7.89□□□□□ -1.15
VCAN-208ENST00000512590 IGSF5Q9NSI5 407 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 DNAJC15Q9Y5T4 150 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 MPC1Q9Y5U8 109 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 TMEM200CA6NKL6 621 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 H3BP45 60 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 CLDN14O95500 239 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 TMEM33P57088 247 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 NEURL3Q96EH8 262 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 GALNT14Q96FL9 552 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 GPR82Q96P67 336 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 SYT11Q9BT88 431 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 ZMIZ1Q9ULJ6 1067 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 RAF1P04049 648 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 HIST1H1AQ02539 215 aaPredicted RBP7.89□□□□□ -1.15
VCAN-208ENST00000512590 CCBE1Q6UXH8 406 aaPredicted RBP7.89□□□□□ -1.15
VCAN-208ENST00000512590 OR1L8Q8NGR8 309 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 TEAD3Q99594 435 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 SCNM1Q9BWG6 230 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 MRPL13Q9BYD1 178 aaKnown RBP7.89□□□□□ -1.15
VCAN-208ENST00000512590 AHRRA9YTQ3 701 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 HOXD3P31249 432 aaPredicted RBP7.89□□□□□ -1.15
VCAN-208ENST00000512590 Q5PR19 223 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 SEC11CQ9BY50 192 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 A4GALTQ9NPC4 353 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 NSG2Q9Y328 171 aa7.89□□□□□ -1.15
VCAN-208ENST00000512590 IGHV3-72A0A0B4J1Y9 119 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 B4E171 279 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 NPPCP23582 126 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 EGLN2Q96KS0 407 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 CCL13Q99616 98 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 C2orf88Q9BSF0 95 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 MAP1LC3CQ9BXW4 147 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 MMP25Q9NPA2 562 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 MED1Q15648 1581 aaPredicted RBP7.88□□□□□ -1.15
VCAN-208ENST00000512590 TMEM189A5PLL7 270 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 NDUFA2O43678 99 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 GJB3O75712 270 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 PNPP00491 289 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 FGF5P12034 268 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 SLC38A11Q08AI6 406 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 SLC25A53Q5H9E4 307 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 ZNF385CQ66K41 422 aaPredicted RBP7.88□□□□□ -1.15
VCAN-208ENST00000512590 OR6X1Q8NH79 312 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 MARVELD3Q96A59 401 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 COL25A1Q9BXS0 654 aaPredicted RBP7.88□□□□□ -1.15
VCAN-208ENST00000512590 A0A1W2PPC1 479 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 H7C1H1 209 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 OGG1O15527 345 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 TSPAN13O95857 204 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 SEC11BP0C7V7 166 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 PRDX2P32119 198 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 CD69Q07108 199 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 CSRP2Q16527 193 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 DMRTC1Q5HYR2 192 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 AFMIDQ63HM1 303 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 OR8G5Q8NG78 346 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 SLC45A3Q96JT2 553 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 TMEM167BQ9NRX6 74 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 ASAH2BP0C7U1 165 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 GZMHP20718 246 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 RANP62826 216 aaKnown RBP7.88□□□□□ -1.15
VCAN-208ENST00000512590 CX3CL1P78423 397 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 DLK1P80370 383 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 PDZD11Q5EBL8 140 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 ZNF561Q8N587 486 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 RXFP4Q8TDU9 374 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 SRD5A3Q9H8P0 318 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 CCSO14618 274 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 DSCR9P59020 149 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 GABRA6Q16445 453 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 PROX2Q3B8N5 592 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 HIKESHIQ53FT3 197 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 ADAD2Q8NCV1 583 aaKnown RBP7.88□□□□□ -1.15
VCAN-208ENST00000512590 SPSB1Q96BD6 273 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms