RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	MS4A7	Q9GZW8	240 aa	Predicted RBP	6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	CST11	Q9H112	138 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	WDR13	Q9H1Z4	485 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	GHITM	Q9H3K2	345 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	SPACA1	Q9HBV2	294 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	HES4	Q9HCC6	221 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	RAB9B	Q9NP90	201 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	ONECUT1	Q9UBC0	465 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	ING4	Q9UNL4	249 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	GSTK1	Q9Y2Q3	226 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	KPTN	Q9Y664	436 aa		6.21	□□□□□ -1.42
NR1I3-231	ENST00000512340	IGKV1D-17	A0A075B6S4	117 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340		A0A087WXM4	84 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	IGKV1-9	A0A0C4DH69	117 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	hADV38S2	A0JD32	116 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340		L7N2F9	121 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340		M0R1W7	72 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	CCRL2	O00421	344 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	TNFRSF13B	O14836	293 aa	Predicted RBP	6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	MGST3	O14880	152 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	DEGS1	O15121	323 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	SPRY1	O43609	319 aa	Predicted RBP	6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	HTR3B	O95264	441 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	LALBA	P00709	142 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	MAS1	P04201	325 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	GTF2F2	P13984	249 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	SELL	P14151	372 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	ADRA2C	P18825	462 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	BCL3	P20749	454 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	EPHA1	P21709	976 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	GAL	P22466	123 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	PSMB9	P28065	219 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	KCNJ3	P48549	501 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	FGF12	P61328	243 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	ERVK11-1	P61568	191 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	PAX8	Q06710	450 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	SCN1B	Q07699	218 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	IL13RA2	Q14627	380 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	ZNF146	Q15072	292 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	TIMM50	Q3ZCQ8	353 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	XAF1	Q6GPH4	301 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	ELP2	Q6IA86	826 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	ZNF529	Q6P280	563 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	ZNF773	Q6PK81	442 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	ZNF841	Q6ZN19	808 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	PRIMA1	Q86XR5	153 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	FAM185A	Q8N0U4	392 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	OR5D18	Q8NGL1	313 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	C8orf46	Q8TAG6	207 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	RFT1	Q96AA3	541 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	DACT3	Q96B18	629 aa	Predicted RBP	6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	PGLYRP3	Q96LB9	341 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	GAFA1	Q96PS6	74 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	OR5M11	Q96RB7	305 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	PCGF1	Q9BSM1	259 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	BARHL1	Q9BZE3	327 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	METTL8	Q9H825	291 aa	Known RBP	6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	HEXA-AS1	Q9H8Q6	139 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	HMG20A	Q9NP66	347 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	NOX4	Q9NPH5	578 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	IL36G	Q9NZH8	169 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	MTCH1	Q9NZJ7	389 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	RPUSD1	Q9UJJ7	312 aa	Known RBP	6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	LSM2	Q9Y333	95 aa	Known RBP	6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	DMRT1	Q9Y5R6	373 aa		6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	SIRT4	Q9Y6E7	314 aa	Predicted RBP	6.2	□□□□□ -1.42
NR1I3-231	ENST00000512340	IGKV1-27	A0A075B6S5	117 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	TRGV10	A0A0A0MS01	117 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	TRBV5-7	A0A0A0MS05	114 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340		K7N7A8	449 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	TCF21	O43680	179 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	ANGPTL7	O43827	346 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	TK1	P04183	234 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	IGFBP3	P17936	291 aa	Predicted RBP	6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	SRM	P19623	302 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	RPL5	P46777	297 aa	Known RBP	6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	EDDM3B	P56851	147 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	SEC61A1	P61619	476 aa	Known RBP	6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	COL10A1	Q03692	680 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	EMX1	Q04741	257 aa	Predicted RBP	6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	RBM39	Q14498	530 aa	Known RBP	6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	GRK1	Q15835	563 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	MPV17L	Q2QL34	196 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	AWAT2	Q6E213	333 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	TRAPPC6B	Q86SZ2	158 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	PHC2	Q8IXK0	858 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	OSR2	Q8N2R0	312 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	ZNRF1	Q8ND25	227 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	OR52N4	Q8NGI2	321 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	GRPEL2	Q8TAA5	225 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	RGP1	Q92546	391 aa	Predicted RBP	6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	TMEM203	Q969S6	136 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	UPRT	Q96BW1	309 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	ZNF488	Q96MN9	340 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	WDFY2	Q96P53	400 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	SPACA5	Q96QH8	159 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	TMPRSS13	Q9BYE2	586 aa		6.19	□□□□□ -1.42
NR1I3-231	ENST00000512340	FGF23	Q9GZV9	251 aa	Predicted RBP	6.19	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms