RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 MFGE8Q08431 387 aaPredicted RBP7.2□□□□□ -1.26
NUP54-211ENST00000512151 TBCEQ15813 527 aaPredicted RBP7.2□□□□□ -1.26
NUP54-211ENST00000512151 SNAI3Q3KNW1 292 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ABCA11PQ4W5N1 156 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 RNLSQ5VYX0 342 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 DEGS2Q6QHC5 323 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 MRPL21Q7Z2W9 205 aaKnown RBP7.2□□□□□ -1.26
NUP54-211ENST00000512151 OSR2Q8N2R0 312 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 NANOGP1Q8N7R0 232 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 KLHL30-AS1Q8NEE0 82 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 OR1M1Q8NGA1 313 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ANGPTL6Q8NI99 470 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ASB17Q8WXJ9 295 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 C4orf36Q96KX1 117 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 KRTAP4-12Q9BQ66 201 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 DCUN1D5Q9BTE7 237 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 IKZF2Q9UKS7 526 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 LSM2Q9Y333 95 aaKnown RBP7.2□□□□□ -1.26
NUP54-211ENST00000512151 NOP16Q9Y3C1 178 aaKnown RBP7.2□□□□□ -1.26
NUP54-211ENST00000512151 SIRT4Q9Y6E7 314 aaPredicted RBP7.2□□□□□ -1.26
NUP54-211ENST00000512151 SEC14L6B5MCN3 397 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 M0R135 149 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 SLC22A1O15245 554 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 ZNF254O75437 659 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 SULT1C4O75897 302 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 RPP14O95059 124 aaKnown RBP7.19□□□□□ -1.26
NUP54-211ENST00000512151 KRT8P05787 483 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 HCKP08631 526 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 ACAA1P09110 424 aaPredicted RBP7.19□□□□□ -1.26
NUP54-211ENST00000512151 CCL3L1P16619 93 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 CD24P25063 80 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 CALRP27797 417 aaKnown RBP7.19□□□□□ -1.26
NUP54-211ENST00000512151 HSD11B1P28845 292 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 RIDAP52758 137 aaKnown RBP7.19□□□□□ -1.26
NUP54-211ENST00000512151 ZNF121P58317 390 aaPredicted RBP7.19□□□□□ -1.26
NUP54-211ENST00000512151 NANOS3P60323 173 aaKnown RBP7.19□□□□□ -1.26
NUP54-211ENST00000512151 GRB2P62993 217 aaKnown RBP7.19□□□□□ -1.26
NUP54-211ENST00000512151 MALLQ13021 153 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 TAF13Q15543 124 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 CTF1Q16619 201 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.19□□□□□ -1.26
NUP54-211ENST00000512151 CROCCP3Q8IVE0 287 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 SYS1Q8N2H4 156 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 PRSS35Q8N3Z0 413 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 YIPF7Q8N8F6 280 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 ZNRF1Q8ND25 227 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 OR56B2PQ8NGI1 322 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 LINC00476Q8WZB0 136 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 FOXRED1Q96CU9 486 aaPredicted RBP7.19□□□□□ -1.26
NUP54-211ENST00000512151 PELI1Q96FA3 418 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 ZNF799Q96GE5 643 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 MROQ9BYG7 248 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 PLGRKTQ9HBL7 147 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 BRD7Q9NPI1 651 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 FAM206AQ9NX38 181 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 MRPL15Q9P015 296 aaKnown RBP7.19□□□□□ -1.26
NUP54-211ENST00000512151 GNG8Q9UK08 70 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 SLC22A13Q9Y226 551 aa7.19□□□□□ -1.26
NUP54-211ENST00000512151 TMEM269A0A1B0GVZ9 245 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 PSMB11A5LHX3 300 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 GGT3PA6NGU5 568 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 CCL24O00175 119 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 CDIPTO14735 213 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 ARG1P05089 322 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 ZNF182P17025 639 aaPredicted RBP7.18□□□□□ -1.26
NUP54-211ENST00000512151 MYL12AP19105 171 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 PSMB9P28065 219 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 DCTDP32321 178 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 KIR3DL2P43630 455 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 TPTEP56180 551 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 PSMA6P60900 246 aaKnown RBP7.18□□□□□ -1.26
NUP54-211ENST00000512151 SPCS2Q15005 226 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 DEFB136Q30KP8 78 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 GLYATL3Q5SZD4 288 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 TMEM200BQ69YZ2 307 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 DRAM2Q6UX65 266 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 FAM57BQ71RH2 274 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 CATSPERDQ86XM0 798 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 OR8B12Q8NGG6 310 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 OR52N1Q8NH53 320 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 SPTSSAQ969W0 71 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 SGK3Q96BR1 496 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 MALSU1Q96EH3 234 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 MED30Q96HR3 178 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 DNTTIP1Q9H147 329 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 C14orf119Q9NWQ9 140 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 BABAM2Q9NXR7 383 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 FRRS1LQ9P0K9 344 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 TBL2Q9Y4P3 447 aaKnown RBP7.18□□□□□ -1.26
NUP54-211ENST00000512151 HILPDAQ9Y5L2 63 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 N6AMT1Q9Y5N5 214 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 R4GMQ9 66 aa7.18□□□□□ -1.26
NUP54-211ENST00000512151 MUC4Q99102 2169 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 IGKV1D-17A0A075B6S4 117 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 OGG1O15527 345 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 IGLV3-1P01715 115 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 TTRP02766 147 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 ANXA2P07355 339 aaKnown RBP7.17□□□□□ -1.26
NUP54-211ENST00000512151 AZGP1P25311 298 aaKnown RBP7.17□□□□□ -1.26
NUP54-211ENST00000512151 DLX6P56179 175 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms