RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 FAM172BPA6NC97 362 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 ODF3BA8MYP8 253 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 DEGS1O15121 323 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 JUNBP17275 347 aaPredicted RBP13.37□□□□□ -0.27
DDX41-213ENST00000512027 LMO1P25800 156 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 GDNFP39905 211 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 LGALS4P56470 323 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 KRTAP10-3P60369 221 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 DYNC1I2Q13409 638 aaKnown RBP13.37□□□□□ -0.27
DDX41-213ENST00000512027 PRAMEF5Q5TYX0 476 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 OLFML2AQ68BL7 652 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 DHRS7BQ6IAN0 325 aaPredicted RBP13.37□□□□□ -0.27
DDX41-213ENST00000512027 SHISA2Q6UWI4 295 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 GDPGP1Q6ZNW5 385 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 PXT1Q8NFP0 134 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 PPP1R35Q8TAP8 253 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 WFDC12Q8WWY7 111 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 PPIL3Q9H2H8 161 aaKnown RBP13.37□□□□□ -0.27
DDX41-213ENST00000512027 PAK1IP1Q9NWT1 392 aaPredicted RBP13.37□□□□□ -0.27
DDX41-213ENST00000512027 MMP24Q9Y5R2 645 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 MGAM2Q2M2H8 2515 aa13.37□□□□□ -0.27
DDX41-213ENST00000512027 CMYA5Q8N3K9 4069 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 CLPSL1A2RUU4 121 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 POM121CA8CG34 1229 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 H0YJX3 145 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 CLPXO76031 633 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 HTR3BO95264 441 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 RBP4P02753 201 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 IGFBP3P17936 291 aaPredicted RBP13.36□□□□□ -0.27
DDX41-213ENST00000512027 CELP19835 753 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 ERP29P30040 261 aaKnown RBP13.36□□□□□ -0.27
DDX41-213ENST00000512027 BDKRB2P30411 391 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 MTNR1BP49286 362 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 WNT4P56705 351 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 PPP3R1P63098 170 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 RIPK1Q13546 671 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 RSU1Q15404 277 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 LRRC75BQ2VPJ9 315 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 Q499Y3 187 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 ZNF626Q68DY1 528 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 NANOGP1Q8N7R0 232 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 OR13D1Q8NGV5 346 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 OR5R1Q8NH85 324 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 LINC01006Q8NI28 216 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 MEGF9Q9H1U4 602 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 RHOFQ9HBH0 211 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 TMEM138Q9NPI0 162 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 ING4Q9UNL4 249 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 SESN1Q9Y6P5 492 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 VWFP04275 2813 aa13.36□□□□□ -0.27
DDX41-213ENST00000512027 IGHV2-26A0A0B4J1V2 119 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 TRAV24A0A0B4J272 114 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 A0A1W2PP11 408 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 FAM90A8PA6NJQ4 464 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 PTGES3LE9PB15 166 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 CDK1P06493 297 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 ZNF93P35789 620 aaPredicted RBP13.35□□□□□ -0.27
DDX41-213ENST00000512027 PTGFRP43088 359 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 RAB13P51153 203 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 RPL15P61313 204 aaKnown RBP13.35□□□□□ -0.27
DDX41-213ENST00000512027 INSL4Q14641 139 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 YIF1BQ5BJH7 314 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 KRBOX4Q5JUW0 171 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 C6orf141Q5SZD1 244 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 UTF1Q5T230 341 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 ELP2Q6IA86 826 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 OR11H6Q8NGC7 330 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 PIFOQ8TCI5 191 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 CPNE2Q96FN4 548 aaPredicted RBP13.35□□□□□ -0.27
DDX41-213ENST00000512027 ZNF184Q99676 751 aaPredicted RBP13.35□□□□□ -0.27
DDX41-213ENST00000512027 SLITRK2Q9H156 845 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 RNF114Q9Y508 228 aa13.35□□□□□ -0.27
DDX41-213ENST00000512027 TRGV10A0A0A0MS01 117 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 TRBV5-7A0A0A0MS05 114 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 ODAMA1E959 279 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 MEGF11A6BM72 1044 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 CHST1O43916 411 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 ALDOBP05062 364 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 SERPINA2P20848 420 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 CDK2P24941 298 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 TAS2R43P59537 309 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 FAM189A2Q15884 450 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 SSX2Q16385 188 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 PAN3Q58A45 887 aaKnown RBP13.34□□□□□ -0.27
DDX41-213ENST00000512027 ASCL4Q6XD76 172 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 CHST4Q8NCG5 386 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 OR51T1Q8NGJ9 327 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 PLPPR1Q8TBJ4 325 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 OR5M11Q96RB7 305 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 TMEM133Q9H2Q1 129 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 SIGLEC9Q9Y336 463 aa13.34□□□□□ -0.27
DDX41-213ENST00000512027 UBE2J1Q9Y385 318 aaPredicted RBP13.34□□□□□ -0.27
DDX41-213ENST00000512027 A0A1B0GUS0 222 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 PIN1P1O15428 100 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 MAS1P04201 325 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 CSN2P05814 226 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 FSTP19883 344 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 TGFBR2P37173 567 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 IL13RA2Q14627 380 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 SGMS2Q8NHU3 365 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms