RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CFAP53Q96M91 514 aa1.55□□□□□ -2.16
CHD1-207ENST00000511628 TSSK6Q9BXA6 273 aa1.55□□□□□ -2.16
CHD1-207ENST00000511628 ULBP1Q9BZM6 244 aa1.55□□□□□ -2.16
CHD1-207ENST00000511628 FBXL15Q9H469 300 aa1.55□□□□□ -2.16
CHD1-207ENST00000511628 NRBP2Q9NSY0 501 aa1.55□□□□□ -2.16
CHD1-207ENST00000511628 SHROOM3Q8TF72 1996 aa1.55□□□□□ -2.16
CHD1-207ENST00000511628 NRCAMQ92823 1304 aa1.55□□□□□ -2.16
CHD1-207ENST00000511628 NID2Q14112 1375 aa1.55□□□□□ -2.16
CHD1-207ENST00000511628 DHX57Q6P158 1386 aaKnown RBP1.55□□□□□ -2.16
CHD1-207ENST00000511628 PRR14LQ5THK1 2151 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 TRAV8-3A0A0A6YYJ7 113 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 A0A1B0GX12 115 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 PGPA6NDG6 321 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 ZNF729A6NN14 1252 aaPredicted RBP1.54□□□□□ -2.16
CHD1-207ENST00000511628 RNASEK-C17orf49H0YIS7 233 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 RGS5O15539 181 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 PDCD6O75340 191 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 NDUFS6O75380 124 aaKnown RBP1.54□□□□□ -2.16
CHD1-207ENST00000511628 KLHL2O95198 593 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 IGKV1D-33P01593 117 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 IGKV1-33P01594 117 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 KLF3P57682 345 aaPredicted RBP1.54□□□□□ -2.16
CHD1-207ENST00000511628 HBG1P69891 147 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 HBG2P69892 147 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 BAMBIQ13145 260 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 TMED1Q13445 227 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 ENDOGQ14249 297 aaKnown RBP1.54□□□□□ -2.16
CHD1-207ENST00000511628 BSXQ3C1V8 233 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 KRTAP25-1Q3LHN0 102 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 PDZD11Q5EBL8 140 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 MRPL2Q5T653 305 aaKnown RBP1.54□□□□□ -2.16
CHD1-207ENST00000511628 BRD3OSQ6XYD6 125 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 AMN1Q8IY45 258 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 ZIC4Q8N9L1 334 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 ACTL9Q8TC94 416 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 TWIST2Q8WVJ9 160 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 CCDC124Q96CT7 223 aaKnown RBP1.54□□□□□ -2.16
CHD1-207ENST00000511628 PGLYRP3Q96LB9 341 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 YPEL4Q96NS1 127 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 OR2V2Q96R30 315 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 ACBD6Q9BR61 282 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 ANAPC13Q9BS18 74 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 SUCNR1Q9BXA5 334 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 TXNIPQ9H3M7 391 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 DSN1Q9H410 356 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 METTL17Q9H7H0 456 aaPredicted RBP1.54□□□□□ -2.16
CHD1-207ENST00000511628 DIABLOQ9NR28 239 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 INIPQ9NRY2 104 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 BTRCQ9Y297 605 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 USH1CQ9Y6N9 552 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 ICOSQ9Y6W8 199 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 NOS1P29475 1434 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 ADGRL1O94910 1474 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 ZSWIM8A7E2V4 1837 aa1.54□□□□□ -2.16
CHD1-207ENST00000511628 C4orf51C9J302 202 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 C8orf87E5RJ46 101 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 H3BQ85 93 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 M0QX08 132 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 POLR3GO15318 223 aaPredicted RBP1.53□□□□□ -2.16
CHD1-207ENST00000511628 TNFAIP8O95379 198 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 FADS2O95864 444 aaKnown RBP1.53□□□□□ -2.16
CHD1-207ENST00000511628 GTF2F2P13984 249 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 SYT1P21579 422 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 PRTN3P24158 256 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 CD34P28906 385 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 S100A2P29034 98 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 FLI1Q01543 452 aaPredicted RBP1.53□□□□□ -2.16
CHD1-207ENST00000511628 NXNL2Q5VZ03 156 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 TMEM215Q68D42 235 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 ZNF470Q6ECI4 717 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 ELP2Q6IA86 826 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 LAIR2Q6ISS4 152 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 CLEC20AQ6ZU45 233 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 FAM19A3Q7Z5A8 133 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 YIPF5Q969M3 257 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 OTUB2Q96DC9 234 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 CYTH2Q99418 400 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 TAPBPLQ9BX59 468 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 MS4A12Q9NXJ0 267 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 ZNF230Q9UIE0 474 aaPredicted RBP1.53□□□□□ -2.16
CHD1-207ENST00000511628 ZNF391Q9UJN7 358 aa1.53□□□□□ -2.16
CHD1-207ENST00000511628 TBL2Q9Y4P3 447 aaKnown RBP1.53□□□□□ -2.16
CHD1-207ENST00000511628 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 ABCB11O95342 1321 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 IGHV3-21A0A0B4J1V1 117 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 GMNCA6NCL1 334 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 CD300LBA8K4G0 201 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 IQCF5A8MTL0 148 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 HSBP1L1C9JCN9 74 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 F5H5P2 479 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 IGHMP01871 453 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 P0C880 135 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 SCGB1C2P0DMR2 95 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 SLC2A1P11166 492 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 GABRA1P14867 456 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 CNTFRP26992 372 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 RPA3P35244 121 aaPredicted RBP1.52□□□□□ -2.17
CHD1-207ENST00000511628 NUDT2P50583 147 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 RAB25P57735 213 aa1.52□□□□□ -2.17
CHD1-207ENST00000511628 RAB31Q13636 194 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms