RNA–Protein interactions for RNA: ENST00000511355.5

NME1-209, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 5 BASIC

Gene NME1, Length 1,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-209ENST00000511355 LUZP4Q9P127 313 aa12.11□□□□□ -0.47
NME1-209ENST00000511355 SPRR3Q9UBC9 169 aa12.11□□□□□ -0.47
NME1-209ENST00000511355 BOD1L1Q8NFC6 3051 aa12.11□□□□□ -0.47
NME1-209ENST00000511355 SPTA1P02549 2419 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 A0A1B0GW64 132 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 OR6C6A6NF89 314 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 H7C1Q1 480 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 GPR31O00270 319 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 SGCEO43556 437 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 SYNGR3O43761 229 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 RAMP1O60894 148 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 IFNA4P05014 189 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 FAHP16930 419 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 P2RY1P47900 373 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 MTCP1P56278 107 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 CLDN15P56746 228 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 CARD18P57730 90 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 RSU1Q15404 277 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 RNF212Q495C1 297 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 LGI3Q8N145 548 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 ZIC4Q8N9L1 334 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 OR1F12Q8NHA8 337 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 CMSS1Q9BQ75 279 aaKnown RBP12.1□□□□□ -0.47
NME1-209ENST00000511355 EGLN1Q9GZT9 426 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 TLNRD1Q9H1K6 362 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 RNF122Q9H9V4 155 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 FBXO9Q9UK97 447 aaPredicted RBP12.1□□□□□ -0.47
NME1-209ENST00000511355 TMED3Q9Y3Q3 217 aa12.1□□□□□ -0.47
NME1-209ENST00000511355 TLN1Q9Y490 2541 aaKnown RBP12.1□□□□□ -0.47
NME1-209ENST00000511355 DUXBA0A1W2PPF3 345 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 SMAD9O15198 467 aaKnown RBP12.09□□□□□ -0.47
NME1-209ENST00000511355 NUPL2O15504 423 aaKnown RBP12.09□□□□□ -0.47
NME1-209ENST00000511355 GPR137BO60478 399 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 HOXB5P09067 269 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 TMEM225BP0DP42 221 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 HOXB1P14653 301 aaPredicted RBP12.09□□□□□ -0.47
NME1-209ENST00000511355 CHATP28329 748 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 S100A12P80511 92 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 SRSF1Q07955 248 aaKnown RBP eCLIP12.09□□□□□ -0.47
NME1-209ENST00000511355 TMEM187Q14656 261 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 PEA15Q15121 130 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 SWI5Q1ZZU3 235 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 FAM76BQ5HYJ3 339 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 GGNBP1Q5YKI7 109 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 ZNF324BQ6AW86 544 aaPredicted RBP12.09□□□□□ -0.47
NME1-209ENST00000511355 C15orf54Q8N8G6 183 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 LFNGQ8NES3 379 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 OR8G5Q8NG78 346 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 SARAFQ96BY9 339 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 BORCS8Q96FH0 119 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 RBM24Q9BX46 236 aaKnown RBP12.09□□□□□ -0.47
NME1-209ENST00000511355 SRXN1Q9BYN0 137 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 PRDM14Q9GZV8 571 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 ZNF286AQ9HBT8 521 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 SMCO4Q9NRQ5 59 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 SLC7A11Q9UPY5 501 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 STARD10Q9Y365 291 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 TIMM10BQ9Y5J6 103 aa12.09□□□□□ -0.47
NME1-209ENST00000511355 E9PLN8 166 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 SDCBPO00560 298 aaPredicted RBP12.08□□□□□ -0.48
NME1-209ENST00000511355 XRCC2O43543 280 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 CXCL13O43927 109 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 HTR3BO95264 441 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 ZNF728P0DKX0 622 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 DUSP1P28562 367 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 FCGR2CP31995 323 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 RAB13P51153 203 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 TSC22D1Q15714 1073 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 KRTCAP3Q53RY4 240 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 RPL7L1Q6DKI1 246 aaKnown RBP12.08□□□□□ -0.48
NME1-209ENST00000511355 LIAT1Q6ZQX7 453 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 WDYHV1Q96HA8 205 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 ZNF385AQ96PM9 386 aaKnown RBP12.08□□□□□ -0.48
NME1-209ENST00000511355 GINS3Q9BRX5 216 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 ZNF701Q9NV72 531 aaPredicted RBP12.08□□□□□ -0.48
NME1-209ENST00000511355 GSKIPQ9P0R6 139 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 MCTS1Q9ULC4 181 aaKnown RBP12.08□□□□□ -0.48
NME1-209ENST00000511355 KIAA1549Q9HCM3 1950 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 MED6O75586 246 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 CDS2O95674 445 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 KNG1P01042 644 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 SFTPBP07988 381 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 S100A10P60903 97 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 SRYQ05066 204 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 ABCA11PQ4W5N1 156 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 PHYHD1Q5SRE7 291 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 AVPI1Q5T686 147 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 SAXO1Q8IYX7 474 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 OSR2Q8N2R0 312 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 LRRC18Q8N456 261 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 SPSB4Q96A44 273 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 ZNF775Q96BV0 537 aaPredicted RBP12.08□□□□□ -0.48
NME1-209ENST00000511355 MOB3AQ96BX8 217 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 REEP6Q96HR9 211 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 C18orf12Q96KH6 178 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 TMEM38BQ9NVV0 291 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 AMDHD2Q9Y303 409 aa12.08□□□□□ -0.48
NME1-209ENST00000511355 FLNBO75369 2602 aaKnown RBP12.07□□□□□ -0.48
NME1-209ENST00000511355 MED12Q93074 2177 aa12.07□□□□□ -0.48
NME1-209ENST00000511355 DANCRP0C864 163 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms