RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 TRIM25Q14258 630 aaKnown RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 CDSNQ15517 529 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 MEP1BQ16820 701 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 NKAPLQ5M9Q1 402 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 AADACL4Q5VUY2 407 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 RAB12Q6IQ22 244 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 SLC25A26Q70HW3 274 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 HMGN2P46Q86SG4 172 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 PRIMA1Q86XR5 153 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 NKAIN4Q8IVV8 208 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 UBE2DNLQ8IWF7 75 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 CMTM1Q8IZ96 169 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ZDHHC22Q8N966 263 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 OR4K15Q8NH41 348 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 OTOSQ8NHW6 89 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF420Q8TAQ5 688 aaPredicted RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 RNF133Q8WVZ7 376 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 DCUN1D4Q92564 292 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 TAMM41Q96BW9 452 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 PPP1R14BQ96C90 147 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF488Q96MN9 340 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 RDH12Q96NR8 316 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 DUX5Q96PT3 197 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 TSPAN32Q96QS1 320 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 CIB1Q99828 191 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ABHD6Q9BV23 337 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 TMED9Q9BVK6 235 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 MRPL13Q9BYD1 178 aaKnown RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 MEGF9Q9H1U4 602 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 OR51J1Q9H342 316 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 TMEM138Q9NPI0 162 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 GPR84Q9NQS5 396 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 TAS2R5Q9NYW4 299 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ARMCX1Q9P291 453 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 GIMAP2Q9UG22 337 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 UFC1Q9Y3C8 167 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 MAST4O15021 2626 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 HUWE1Q7Z6Z7 4374 aaKnown RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 A0A1W2PS29 197 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 CXorf65A6NEN9 183 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 NUPR2A6NF83 97 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ITM2AO43736 263 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 TK1P04183 234 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 MMP7P09237 267 aaPredicted RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 SPI1P17947 270 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 BDKRB2P30411 391 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 CCR9P51686 369 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 PLA2G7Q13093 441 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 PCK2Q16822 640 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 KCTD21Q4G0X4 260 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 OXLD1Q5BKU9 147 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 PDZD9Q8IXQ8 264 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 CADM3Q8N126 398 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 STPG3Q8N7X2 389 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 RGP1Q92546 391 aaPredicted RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 FAM46BQ96A09 425 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 TMEM56Q96MV1 263 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 FAM210AQ96ND0 272 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 CHIAQ9BZP6 476 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 MMP28Q9H239 520 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF286AQ9HBT8 521 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 SNTG1Q9NSN8 517 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF225Q9UK10 706 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 WASHC3Q9Y3C0 194 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 HILPDAQ9Y5L2 63 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 TRBV2A0A0J9YWF9 115 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ODAMA1E959 279 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 FAM172BPA6NC97 362 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 OR5H14A6NHG9 310 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 LINC01619G3V211 115 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 M0R129 80 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 AIPO00170 330 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 CCL24O00175 119 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 SDCBPO00560 298 aaPredicted RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 SYNGR1O43759 233 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 EFNA2O43921 213 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 NOS1APO75052 506 aaPredicted RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 FKBP6O75344 327 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 LY6HO94772 140 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 PLATP00750 562 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 CDK2P24941 298 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 PSMB10P40306 273 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ID1P41134 155 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 THBS3P49746 956 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 GNB1P62873 340 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 RPL11P62913 178 aaKnown RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ATP5G2Q06055 141 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 MST1LQ2TV78 715 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ACSM3Q53FZ2 586 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 FAM71F2Q6NXP2 309 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 UNQ5815/PRO19632Q6UWF5 114 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF788Q6ZQV5 615 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 UTS2BQ765I0 119 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 MMD2Q8IY49 270 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 POU5F2Q8N7G0 328 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 OR56B1Q8NGI3 324 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 OR1N2Q8NGR9 330 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 LINC01006Q8NI28 216 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms