RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 CDH24Q86UP0 819 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 LRRC75AQ8NAA5 344 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 UBAC2Q8NBM4 344 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 OR52I2Q8NH67 350 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 NTNG2Q96CW9 530 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 C1QTNF5Q9BXJ0 243 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 NMNAT2Q9BZQ4 307 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 RTN4RQ9BZR6 473 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 OR51J1Q9H342 316 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 DENND4AQ7Z401 1863 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 A0A1W2PPV4 95 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 IQCF6A8MYZ5 107 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 K7N7A8 449 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 GAPDHP04406 335 aaKnown RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 OR8U9P0C7N5 309 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 HLA-DRB3P79483 266 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 TAGLNQ01995 201 aaKnown RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 AESQ08117 197 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 OR4S2Q8NH73 311 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 ADAT3Q96EY9 351 aaPredicted RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 SH2D2AQ9NP31 389 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FANCMQ8IYD8 2048 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 MEIOCA2RUB1 952 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 DCTN6O00399 190 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FCGR3BO75015 233 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 TOX4O94842 621 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 YIF1AO95070 293 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 THY1P04216 161 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 PRB1P04280 392 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 TFAP2AP05549 437 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FGF2P09038 288 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FSTP19883 344 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 ALDH3B2P48448 385 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 TMEM33P57088 247 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 CLEC12BQ2HXU8 276 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 NCMAPQ5T1S8 102 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 ETFRF1Q6IPR1 90 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 PRSS45Q7RTY3 260 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 NAA40Q86UY6 237 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 OR51S1Q8NGJ8 323 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 OR8U1Q8NH10 309 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 ZNF426Q9BUY5 554 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.41□□□□□ -1.75e-7■■■■□ 22.3
PHF3-210ENST00000509876 RBFOX1Q9NWB1 397 aaKnown RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 KLF2Q9Y5W3 355 aaPredicted RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 TECTAO75443 2155 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 LY86O95711 162 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 VDAC1P21796 283 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 LCN2P80188 198 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 Q56UQ5 140 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 PHYHD1Q5SRE7 291 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 BRICD5Q6PL45 260 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A1Q86YD7 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 PXT1Q8NFP0 134 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 AUNIPQ9H7T9 357 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 DENND4CQ5VZ89 1909 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 B3GALNT1O75752 331 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 CELA3BP08861 270 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 HNF4GQ14541 408 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 ZNF826PQ6ZT77 177 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 ARRDC1Q8N5I2 433 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 OR4A4PQ8NGN8 299 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 OR1S2Q8NGQ3 325 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 SDSLQ96GA7 329 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 ZNF488Q96MN9 340 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 SLX1AQ9BQ83 275 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 GON7Q9BXV9 100 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 MRPL37Q9BZE1 423 aaKnown RBP4.4□□□□□ -1.7
PHF3-210ENST00000509876 SLC35D1Q9NTN3 355 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 METRNQ9UJH8 293 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 SLC25A15Q9Y619 301 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 USF1P22415 310 aaPredicted RBP4.4□□□□□ -1.7
PHF3-210ENST00000509876 MPV17P39210 176 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 PIGYQ3MUY2 71 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 ATPAF1Q5TC12 328 aaPredicted RBP4.4□□□□□ -1.7
PHF3-210ENST00000509876 PCSK4Q6UW60 755 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 NANPQ8TBE9 248 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 GIMAP1Q8WWP7 306 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 C20orf85Q9H1P6 137 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 IDI2-AS1Q9NZ38 188 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 AK3Q9UIJ7 227 aa4.4□□□□□ -1.7
PHF3-210ENST00000509876 KLF4O43474 513 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 CTAG2O75638 210 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 OR2H2O95918 312 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 WT1P19544 449 aaPredicted RBP4.4□□□□□ -1.71
PHF3-210ENST00000509876 CAMLGP49069 296 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 PIGPP57054 158 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 FAM27D1Q5T7N8 215 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 FAM169BQ8N8A8 192 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 UBALD1Q8TB05 177 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 TMEM230Q96A57 120 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 C14orf79Q96F83 325 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 RNF167Q9H6Y7 350 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 COA4Q9NYJ1 87 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 IL36GQ9NZH8 169 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 AUP1Q9Y679 476 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 TXNL1O43396 289 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 NPIPB7O75200 414 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 IL7P13232 177 aa4.4□□□□□ -1.71
PHF3-210ENST00000509876 CEACAM8P31997 349 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms