RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, human

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKP2-205	ENST00000509692	LINC00596	Q86U02	117 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	CROCCP3	Q8IVE0	287 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	FGFRL1	Q8N441	504 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	ST8SIA4	Q92187	359 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	TMEM59	Q9BXS4	323 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	CEPT1	Q9Y6K0	416 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	TMEM82	A0PJX8	343 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	ZNF737	O75373	536 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	IFNA2	P01563	188 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	LMO1	P25800	156 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	TAF9	Q16594	264 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	MPV17L	Q2QL34	196 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	IDNK	Q5T6J7	187 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	CHST4	Q8NCG5	386 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	NDNF	Q8TB73	568 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	SNX22	Q96L94	193 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692		Q96M66	194 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	MDFI	Q99750	246 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	TMPRSS13	Q9BYE2	586 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM234A	Q9H0X4	552 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	DCSTAMP	Q9H295	470 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	MMP26	Q9NRE1	261 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692	FBLN5	Q9UBX5	448 aa		13.57	□□□□□ -0.24
SKP2-205	ENST00000509692		A0A0G2JMP0	313 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692		A0A0X1KG70	313 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	TMEM272	A0A1B0GTI8	110 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692		K7N7A8	449 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	LDLRAD4	O15165	306 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	PSPN	O60542	156 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	OR7C1	O76099	320 aa	Predicted RBP	13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	TK1	P04183	234 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	NDUFB7	P17568	137 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	GABRR1	P24046	479 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	SRP14	P37108	136 aa	Known RBP	13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	RPS27A	P62979	156 aa	Known RBP	13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	DCAF12L2	Q5VW00	463 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	METAP1D	Q6UB28	335 aa	Predicted RBP	13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	C17orf107	Q6ZR85	190 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	OR4M2	Q8NGB6	313 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	SLC25A46	Q96AG3	418 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	ISOC1	Q96CN7	298 aa		13.56	□□□□□ -0.24
SKP2-205	ENST00000509692	CCDC160	A6NGH7	325 aa		13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	SLC33A1	O00400	549 aa	Predicted RBP	13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	GPR37	O15354	613 aa		13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	SPCS2	Q15005	226 aa		13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	PPP1R35	Q8TAP8	253 aa		13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	URM1	Q9BTM9	101 aa	Known RBP	13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	TM2D1	Q9BX74	207 aa		13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	CHST6	Q9GZX3	395 aa		13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	IFT22	Q9H7X7	185 aa		13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	ZNF581	Q9P0T4	197 aa		13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	OR5V1	Q9UGF6	321 aa		13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	RAB22A	Q9UL26	194 aa		13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.55	□□□□□ -0.24
SKP2-205	ENST00000509692	LOC105371242	A0A075B767	164 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	TRAV24	A0A0B4J272	114 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	PPIAL4C	A0A0B4J2A2	164 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A10P	A6NDY2	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A18P	A6NE21	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A16P	A6NEW6	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A20P	A6NIJ5	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A8P	A6NJQ4	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A7P	A6NKC0	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A22P	A8MWA6	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A12P	A8MX19	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A5P	A8MXJ8	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A23P	A8MXZ1	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692		H3BMQ9	156 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	TMEM127	O75204	238 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A15P	P0C7V4	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A13P	P0C7W8	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A14P	P0C7W9	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	FAM90A24P	P0C7X0	464 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	SNRPB	P14678	240 aa	Known RBP	13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	OR3A1	P47881	315 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	PLA2G7	Q13093	441 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	GRK1	Q15835	563 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	ATAD3C	Q5T2N8	411 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	CD276	Q5ZPR3	534 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	BTN2A1	Q7KYR7	527 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	OR8H2	Q8N162	312 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	OR4S1	Q8NGB4	309 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	OR5D13	Q8NGL4	314 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	H1FX	Q92522	213 aa	Known RBP	13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	RBM38	Q9H0Z9	239 aa	Known RBP	13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	LPAR5	Q9H1C0	372 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	DSCAML1	Q8TD84	2053 aa		13.54	□□□□□ -0.24
SKP2-205	ENST00000509692	C22orf46	C9J442	243 aa		13.53	□□□□□ -0.24
SKP2-205	ENST00000509692	HSPB6	O14558	160 aa		13.53	□□□□□ -0.24
SKP2-205	ENST00000509692	ECD	O95905	644 aa	Predicted RBP	13.53	□□□□□ -0.24
SKP2-205	ENST00000509692	PAH	P00439	452 aa		13.53	□□□□□ -0.24
SKP2-205	ENST00000509692	C11orf91	Q3C1V1	193 aa		13.53	□□□□□ -0.24
SKP2-205	ENST00000509692	PAN3	Q58A45	887 aa	Known RBP	13.53	□□□□□ -0.24
SKP2-205	ENST00000509692	LGALS14	Q8TCE9	139 aa		13.53	□□□□□ -0.24
SKP2-205	ENST00000509692	NICN1	Q9BSH3	213 aa		13.53	□□□□□ -0.24
SKP2-205	ENST00000509692	MRI1	Q9BV20	369 aa		13.53	□□□□□ -0.24
SKP2-205	ENST00000509692	BARHL1	Q9BZE3	327 aa		13.53	□□□□□ -0.24
SKP2-205	ENST00000509692	PPA2	Q9H2U2	334 aa		13.53	□□□□□ -0.24
SKP2-205	ENST00000509692	SPACA1	Q9HBV2	294 aa		13.53	□□□□□ -0.24
SKP2-205	ENST00000509692	OPN4	Q9UHM6	478 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms