RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 AANATQ16613 207 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 HSD17B12Q53GQ0 312 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 LIPKQ5VXJ0 399 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 GLT8D1Q68CQ7 371 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 ZNF773Q6PK81 442 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 RBMS3Q6XE24 437 aaKnown RBP8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 CEACAM19Q7Z692 300 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 LRRTM1Q86UE6 522 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 OSR2Q8N2R0 312 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 FGFRL1Q8N441 504 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 ASCC1Q8N9N2 400 aaKnown RBP8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 OR5D18Q8NGL1 313 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 SPATA3Q8NHX4 192 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 RFT1Q96AA3 541 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 C1orf147Q96MC9 270 aaPredicted RBP8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 PCGF1Q9BSM1 259 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 BARHL1Q9BZE3 327 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 SLITRK2Q9H156 845 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 TCF7L1Q9HCS4 588 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 NDUFB11Q9NX14 153 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 FBLN5Q9UBX5 448 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 GSTK1Q9Y2Q3 226 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 TRAV40A0A0B4J280 105 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 PNMA8CA0A1B0GUJ8 204 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 TRDV1A0A1B0GX56 115 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 A0A1W2PQ09 198 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 POM121CA8CG34 1229 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 TRIM77I1YAP6 450 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 SLC33A1O00400 549 aaPredicted RBP8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 CA11O75493 328 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 BPNT1O95861 308 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 CGB3P0DN86 165 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 CGB7P0DN87 165 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 P2RX3P56373 397 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 RBM11P57052 281 aaKnown RBP8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 ERVFRD-1P60508 538 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 GRK1Q15835 563 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 OR52W1Q6IF63 320 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 Q6YL49 198 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 SLC16A12Q6ZSM3 486 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 VMO1Q7Z5L0 202 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 LDLRAD3Q86YD5 345 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 ZNF565Q8N9K5 539 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 OR4S1Q8NGB4 309 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 OR11H6Q8NGC7 330 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 OR10A7Q8NGE5 316 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 TMED9Q9BVK6 235 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 C19orf12Q9NSK7 152 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 OR6C3Q9NZP0 311 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 ING4Q9UNL4 249 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 ST3GAL6Q9Y274 331 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 POMT1Q9Y6A1 747 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 TENM1Q9UKZ4 2725 aa8.68□□□□□ -1.02
POLR2J3-213ENST00000508848 TRAV24A0A0B4J272 114 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 RNASEK-C17orf49H0YIS7 233 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 CCRL2O00421 344 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 SLC22A1O15245 554 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 RGS9O75916 674 aaPredicted RBP8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 CDRT1O95170 752 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 VENTXO95231 258 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 TFF1P04155 84 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 HSMCR30P0CW71 290 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 GZMHP20718 246 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 GABRR1P24046 479 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 DUSP1P28562 367 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 MAP2K4P45985 399 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 OR3A4PP47883 348 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 CEBPDP49716 269 aaPredicted RBP8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 SYT6Q5T7P8 510 aaPredicted RBP8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 SLC35E4Q6ICL7 350 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 HEPN1Q6WQI6 88 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 GAPTQ8N292 157 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 JAGN1Q8N5M9 183 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 KCNG3Q8TAE7 436 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 LHX4Q969G2 390 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 CST11Q9H112 138 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 MEGF9Q9H1U4 602 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 PPIL3Q9H2H8 161 aaKnown RBP8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 RCC2Q9P258 522 aaKnown RBP8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 ONECUT1Q9UBC0 465 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 IL36RNQ9UBH0 155 aa8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 MRPS28Q9Y2Q9 187 aaKnown RBP8.67□□□□□ -1.02
POLR2J3-213ENST00000508848 A0A087X0M5 115 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 TRGV10A0A0A0MS01 117 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 A0A1B0GX30 115 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 A0A1W2PPK0 400 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 TRIM64CA6NLI5 447 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 SLC17A2O00624 439 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 TMEM127O75204 238 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 HTR3BO95264 441 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 MAS1P04201 325 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 FBP1P09467 338 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 ZNF44P15621 663 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 CD34P28906 385 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 COMPP49747 757 aaPredicted RBP8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 EDDM3BP56851 147 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 FABP5Q01469 135 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 RBM39Q14498 530 aaKnown RBP8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 FAM189A2Q15884 450 aa8.66□□□□□ -1.02
POLR2J3-213ENST00000508848 SSX1Q16384 188 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms