RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 SERPINB7O75635 380 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 TNFAIP8O95379 198 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 NSA2O95478 260 aaKnown RBP4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 GPR75O95800 540 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 AIFM1O95831 613 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 SERPINA1P01009 418 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 FABP3P05413 133 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 PABPC4LP0CB38 370 aaKnown RBP4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 ZNF43P17038 809 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 CRATP43155 626 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 C21orf59P57076 290 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 SMIM11AP58511 58 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 CXCR4P61073 352 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 RAB14P61106 215 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 BTN3A2P78410 334 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 MERTKQ12866 999 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 C16orf72Q14CZ0 275 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 MLIPQ5VWP3 458 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 KDM4DQ6B0I6 523 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 LCN12Q6JVE5 192 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 ANKRD26P1Q6NSI1 321 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 FAHD1Q6P587 224 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 METAP1DQ6UB28 335 aaPredicted RBP4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 ASCL5Q7RTU5 278 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 SLC25A45Q8N413 288 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 CBR4Q8N4T8 237 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 LINC00471Q8N535 108 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 NPBQ8NG41 125 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 OR10G6Q8NH81 332 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 TEX47Q8TBZ9 253 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 PATE1Q8WXA2 126 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 CIDECQ96AQ7 238 aaPredicted RBP4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 TMIGD2Q96BF3 282 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 TRNT1Q96Q11 434 aaKnown RBP4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 STACQ99469 402 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 FAM192AQ9GZU8 254 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 VCX3AQ9NNX9 186 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 RHBDL2Q9NX52 303 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 CALML5Q9NZT1 146 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 ENOPH1Q9UHY7 261 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 C3orf18Q9UK00 162 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 ANGPT4Q9Y264 503 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 DSPPQ9NZW4 1301 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 TECTAO75443 2155 aa4.46□□□□□ -1.7
COL6A4P1-204ENST00000508169 A0A1B0GTQ1 180 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 WI2-2373I1.2A0A1W2PRP0 233 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 PINLYPA6NC86 204 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 PPP1R2P9O14990 202 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 H6PDO95479 791 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 HMGN1P05114 100 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 CSF3P09919 207 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 CPMP14384 443 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 RCC1P18754 421 aaPredicted RBP4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 BCKDHBP21953 392 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 CPN2P22792 545 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 BMI1P35226 326 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 CSNK1EP49674 416 aaKnown RBP4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 XKP51811 444 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 NCBP2P52298 156 aaKnown RBP eCLIP4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 CRISP3P54108 245 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 RAB38P57729 211 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 RAB8AP61006 207 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 TSPAN5P62079 268 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 PSPHP78330 225 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 ARHGAP11BQ3KRB8 267 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 DEFB134Q4QY38 66 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 PRAMEF20Q5VT98 475 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 RAET1LQ5VY80 246 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 CARD17Q5XLA6 110 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 FRMPD2BQ6IN97 320 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 FAM92BQ6ZTR7 304 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 LRRC25Q8N386 305 aaPredicted RBP4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 MS4A15Q8N5U1 240 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 FAM86B1Q8N7N1 296 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 CCDC54Q8NEL0 328 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 OR7G1Q8NGA0 311 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 OR2G3Q8NGZ4 309 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 OR6X1Q8NH79 312 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 LMX1AQ8TE12 382 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 RNF138Q8WVD3 245 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 GEMIN6Q8WXD5 167 aaKnown RBP4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 TMBIM1Q969X1 311 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 EXOSC8Q96B26 276 aaKnown RBP4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 TAMM41Q96BW9 452 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 PIGUQ9H490 435 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 ANKHQ9HCJ1 492 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 FAM60AQ9NP50 221 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 ACER3Q9NUN7 267 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 FAM32AQ9Y421 112 aaKnown RBP4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 ENPP4Q9Y6X5 453 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 COMMD3-BMI1R4GMX3 469 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 TMEM131Q92545 1883 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 UNC13CQ8NB66 2214 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 EYSQ5T1H1 3165 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 CCDC88CQ9P219 2028 aa4.45□□□□□ -1.7
COL6A4P1-204ENST00000508169 THADAQ6YHU6 1953 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 ASXL3Q9C0F0 2248 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 IGLV3-12A0A075B6K2 115 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 SMIM31A0A1B0GVY4 71 aa4.44□□□□□ -1.7
COL6A4P1-204ENST00000508169 SMCO3A2RU48 225 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms