RNA–Protein interactions for RNA: ENST00000507692.5

SNHG4-205, Transcript of small nucleolar RNA host gene 4, human

TSL 5

Gene SNHG4, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-205	ENST00000507692	ZNF780A	O75290	641 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	CDRT1	O95170	752 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	OR2H2	O95918	312 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	PAH	P00439	452 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	RBP4	P02753	201 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	MAS1	P04201	325 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	CSN2	P05814	226 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	RNASE1	P07998	156 aa	Known RBP	4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	MELTF	P08582	738 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	HSMCR30	P0CW71	290 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	ZNF728	P0DKX0	622 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	CCL3L1	P16619	93 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	SERPINA2	P20848	420 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	ERP29	P30040	261 aa	Known RBP	4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	SAA4	P35542	130 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	OR3A1	P47881	315 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	OR3A4P	P47883	348 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	DLX1	P56177	255 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	P2RX3	P56373	397 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	LGALS4	P56470	323 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	GABARAPL2	P60520	117 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	PRB3	Q04118	309 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	MLLT11	Q13015	90 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	GPR176	Q14439	515 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	ZNF273	Q14593	569 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	IL13RA2	Q14627	380 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	SLC9A3R2	Q15599	337 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	SLC22A6	Q4U2R8	563 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	MIDN	Q504T8	468 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	ACSM3	Q53FZ2	586 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	PAN3	Q58A45	887 aa	Known RBP	4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	KRBOX4	Q5JUW0	171 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	LIPK	Q5VXJ0	399 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	AWAT2	Q6E213	333 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692		Q6P435	159 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	C12orf54	Q6X4T0	127 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	ASCL4	Q6XD76	172 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	TRAPPC6B	Q86SZ2	158 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	LINC00596	Q86U02	117 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	LDLRAD3	Q86YD5	345 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	CDH26	Q8IXH8	852 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	OSR2	Q8N2R0	312 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	JAGN1	Q8N5M9	183 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	TMEM86B	Q8N661	226 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	NKAIN3	Q8N8D7	197 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692		Q8NFD4	153 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	OR4S1	Q8NGB4	309 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	OR10K1	Q8NGX5	313 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	SSMEM1	Q8WWF3	244 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	UFD1	Q92890	307 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	GCDH	Q92947	438 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	ORAI1	Q96D31	301 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	C1orf147	Q96MC9	270 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	NR1H4	Q96RI1	486 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	NKX3-1	Q99801	234 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	TMED9	Q9BVK6	235 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	METTL9	Q9H1A3	318 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	PPA2	Q9H2U2	334 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	DPAGT1	Q9H3H5	408 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	GAL3ST2	Q9H3Q3	398 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	ISYNA1	Q9NPH2	558 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	IL36G	Q9NZH8	169 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	ST3GAL6	Q9Y274	331 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	SF3B6	Q9Y3B4	125 aa	Known RBP	4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	POMT1	Q9Y6A1	747 aa		4.11	□□□□□ -1.75
SNHG4-205	ENST00000507692	TRAV24	A0A0B4J272	114 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692		A0A0U1RQK1	487 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	ODAM	A1E959	279 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	MEX3A	A1L020	520 aa	Known RBP	4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	TMEM89	A2RUT3	159 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	BTBD17	A6NE02	478 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	HSPB6	O14558	160 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	PIN1P1	O15428	100 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	DENR	O43583	198 aa	Known RBP	4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	MRPS14	O60783	128 aa	Known RBP	4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	CLPX	O76031	633 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	OR7C1	O76099	320 aa	Predicted RBP	4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	CRYBA1	P05813	215 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	IGHV1-8	P0DP01	117 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	HKR1	P10072	659 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	GTF2F2	P13984	249 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	CPE	P16870	476 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	COX7A1	P24310	79 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	PSMA1	P25786	263 aa	Known RBP	4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	MAP2K4	P45985	399 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	IER3	P46695	156 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	KCNJ3	P48549	501 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	DLX6	P56179	175 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	RBM11	P57052	281 aa	Known RBP	4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	RPL15	P61313	204 aa	Known RBP	4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	AES	Q08117	197 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	FOXL1	Q12952	345 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	TPBG	Q13641	420 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	INSL4	Q14641	139 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	TBCE	Q15813	527 aa	Predicted RBP	4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	MPV17L	Q2QL34	196 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	PIGY	Q3MUY2	71 aa		4.1	□□□□□ -1.75
SNHG4-205	ENST00000507692	HSD17B12	Q53GQ0	312 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms