RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 IHHQ14623 411 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 TRAM1Q15629 374 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 CEACAM21Q3KPI0 293 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 KRTAP6-3Q3LI67 103 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 HBMQ6B0K9 141 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 AMMECR1LQ6DCA0 310 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 ZIC4Q8N9L1 334 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 TMEM239Q8WW34 195 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 NELFBQ8WX92 580 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 OTUB2Q96DC9 234 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 SUCNR1Q9BXA5 334 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 ENPP5Q9UJA9 477 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 TRAV8-3A0A0A6YYJ7 113 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 PGPA6NDG6 321 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 CD300LBA8K4G0 201 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 F8VP50 259 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 M0QXV9 152 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 PDCD6O75340 191 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 IGHMP01871 453 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 APOA1P02647 267 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 PRTN3P24158 256 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 OR10A3P58181 314 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 VSNL1P62760 191 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 STX3Q13277 289 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 AHSA2Q719I0 299 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 COPS6Q7L5N1 327 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 SSX6Q7RTT6 188 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 COMTD1Q86VU5 262 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 ACTL9Q8TC94 416 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 IGF2BP2-AS1Q96M15 143 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 PKMYT1Q99640 499 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 ANAPC13Q9BS18 74 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 TSSK6Q9BXA6 273 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 SLC25A31Q9H0C2 315 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 DUSP21Q9H596 190 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 DIABLOQ9NR28 239 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 ASF1BQ9NVP2 202 aa1.59□□□□□ -2.15
LSM6-205ENST00000507449 ZNF443Q9Y2A4 671 aaPredicted RBP1.59□□□□□ -2.15
LSM6-205ENST00000507449 THADAQ6YHU6 1953 aa1.59□□□□□ -2.16
LSM6-205ENST00000507449 ZBED9Q6R2W3 1325 aa1.59□□□□□ -2.16
LSM6-205ENST00000507449 A0A0B4J2C4 111 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 ZNF879B4DU55 563 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 K7ERS5 55 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 TCF21O43680 179 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 IGHV3-53P01767 116 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 PRPS1L1P21108 318 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 TSPAN5P62079 268 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 HBG1P69891 147 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 HBG2P69892 147 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 MEF2BQ02080 365 aaPredicted RBP1.58□□□□□ -2.16
LSM6-205ENST00000507449 CD164Q04900 197 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 PRDX1Q06830 199 aaKnown RBP1.58□□□□□ -2.16
LSM6-205ENST00000507449 TPBGQ13641 420 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 TRIP13Q15645 432 aaPredicted RBP1.58□□□□□ -2.16
LSM6-205ENST00000507449 ZBTB6Q15916 424 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 ZNF141Q15928 474 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 TTMPQ5BVD1 217 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 ELP2Q6IA86 826 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 LAIR2Q6ISS4 152 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 HCP5Q6MZN7 132 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 CYHR1Q6ZMK1 362 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 PAGE2Q7Z2X7 111 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 LYPD6Q86Y78 171 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 KRTAP13-1Q8IUC0 172 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 RPRMLQ8N4K4 120 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 GATD1Q8NB37 220 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 MUC7Q8TAX7 377 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 TWIST2Q8WVJ9 160 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 CATSPER2Q96P56 530 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 OLFM3Q96PB7 478 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 ULBP1Q9BZM6 244 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 GABARAPL1Q9H0R8 117 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 GOLPH3Q9H4A6 298 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 ZNF230Q9UIE0 474 aaPredicted RBP1.58□□□□□ -2.16
LSM6-205ENST00000507449 C14orf166Q9Y224 244 aaKnown RBP1.58□□□□□ -2.16
LSM6-205ENST00000507449 SNX24Q9Y343 169 aa1.58□□□□□ -2.16
LSM6-205ENST00000507449 ATRNO75882 1429 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 ZSWIM8A7E2V4 1837 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 FAM25EA8MYX2 175 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 H3BMM0 161 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 HLA-AP01891 365 aaKnown RBP1.57□□□□□ -2.16
LSM6-205ENST00000507449 SCGB1C2P0DMR2 95 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 SLC2A1P11166 492 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 GTF2F2P13984 249 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 GABRA1P14867 456 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 ELK4P28324 431 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 ZNF83P51522 516 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 DHRS2Q13268 280 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 CASP8Q14790 479 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 PYDC2Q56P42 97 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 NXNL2Q5VZ03 156 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 CLEC20AQ6ZU45 233 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 C3orf22Q8N5N4 141 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 SPERTQ8NA61 448 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 LY6G5BQ8NDX9 201 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 SCGB1C1Q8TD33 95 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 UBE2WQ96B02 151 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 PITX2Q99697 317 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 TAS2R13Q9NYV9 303 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms