RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 OR10AD1Q8NGE0 317 aa8.34□□□□□ -1.07
PHF3-208ENST00000506783 CPNE4Q96A23 557 aaPredicted RBP8.34□□□□□ -1.07
PHF3-208ENST00000506783 MVB12AQ96EY5 273 aa8.34□□□□□ -1.07
PHF3-208ENST00000506783 CMTM3Q96MX0 182 aa8.34□□□□□ -1.07
PHF3-208ENST00000506783 ZNF286AQ9HBT8 521 aa8.34□□□□□ -1.07
PHF3-208ENST00000506783 FAM212BQ9NTI7 297 aaPredicted RBP8.34□□□□□ -1.07
PHF3-208ENST00000506783 PROB1E7EW31 1015 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 ST8SIA3O43173 380 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 ZIC3O60481 467 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 S100PP25815 95 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 SUCLG1P53597 346 aaKnown RBP8.33□□□□□ -1.08
PHF3-208ENST00000506783 SSTP61278 116 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 ARF1P84077 181 aaKnown RBP8.33□□□□□ -1.08
PHF3-208ENST00000506783 OVCH2Q7RTZ1 564 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 GAPTQ8N292 157 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 HPSE2Q8WWQ2 592 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 EMG1Q92979 244 aaKnown RBP8.33□□□□□ -1.08
PHF3-208ENST00000506783 RPUSD4Q96CM3 377 aaKnown RBP8.33□□□□□ -1.08
PHF3-208ENST00000506783 USB1Q9BQ65 265 aaKnown RBP8.33□□□□□ -1.08
PHF3-208ENST00000506783 SLC26A1Q9H2B4 701 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 A0A1B0GTQ1 180 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 ZNF705GA8MUZ8 300 aaPredicted RBP8.33□□□□□ -1.08
PHF3-208ENST00000506783 OPN1MWP04001 364 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 OPN1MW2P0DN77 364 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 OPN1MW3P0DN78 364 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 BCL3P20749 454 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 NTF4P34130 210 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 FABP6P51161 128 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 ZNF816Q0VGE8 651 aaPredicted RBP8.33□□□□□ -1.08
PHF3-208ENST00000506783 OSR2Q8N2R0 312 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 ARHGEF39Q8N4T4 335 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 PSMF1Q92530 271 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 EXTL1Q92935 676 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 RSG1Q9BU20 258 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 GLS2Q9UI32 602 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 DUSP13Q9UII6 198 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 TRAPPC2LQ9UL33 140 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 TMEM14DPA8MWL7 114 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 OR2C1O95371 312 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 SP9P0CG40 484 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 RPL23AP62750 156 aaKnown RBP8.33□□□□□ -1.08
PHF3-208ENST00000506783 PSG4Q00888 419 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 HGFACQ04756 655 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 C1orf100Q5SVJ3 147 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 DCAF12Q5T6F0 453 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 TFAP2EQ6VUC0 442 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 SKA3Q8IX90 412 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 LGI3Q8N145 548 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 SLC30A7Q8NEW0 376 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 ZNF285Q96NJ3 590 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 TP53RKQ96S44 253 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 TMPRSS5Q9H3S3 457 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 NECAP2Q9NVZ3 263 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 PRELID3BQ9Y3B1 194 aa8.33□□□□□ -1.08
PHF3-208ENST00000506783 LNP1A1A4G5 178 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 SYNGR1O43759 233 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 HKR1P10072 659 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 EGR1P18146 543 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 FPR2P25090 351 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 S100A2P29034 98 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 HES3Q5TGS1 186 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 ABHD17BQ5VST6 288 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 ZNF880Q6PDB4 577 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 BTNL3Q6UXE8 466 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 ZDHHC22Q8N966 263 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 ADPRHL1Q8NDY3 354 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 OR10V1Q8NGI7 309 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 OR1F12Q8NHA8 337 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 TIMM8BQ9Y5J9 83 aaPredicted RBP8.32□□□□□ -1.08
PHF3-208ENST00000506783 NUP210Q8TEM1 1887 aaPredicted RBP8.32□□□□□ -1.08
PHF3-208ENST00000506783 KIAA1324LA8MWY0 1029 aaPredicted RBP8.32□□□□□ -1.08
PHF3-208ENST00000506783 TRAPPC2LH3BP13 241 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 CYB5BO43169 146 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 CHST1O43916 411 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 GSTP1P09211 210 aaKnown RBP8.32□□□□□ -1.08
PHF3-208ENST00000506783 GRB2P62993 217 aaKnown RBP8.32□□□□□ -1.08
PHF3-208ENST00000506783 EIF5AP63241 154 aaKnown RBP8.32□□□□□ -1.08
PHF3-208ENST00000506783 ARRDC1Q8N5I2 433 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 DEFB108BQ8NET1 73 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 UQCC2Q9BRT2 126 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 GHRLQ9UBU3 117 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 PILRBQ9UKJ0 227 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 HS3ST3B1Q9Y662 390 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 CSPG4Q6UVK1 2322 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 IGKV1-27A0A075B6S5 117 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 CEBPZOSA8MTT3 80 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 TNFSF15O95150 251 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 CLDN1O95832 211 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 MELTFP08582 738 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 H2AFB1P0C5Y9 115 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 MAGEA5P43359 124 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 CYB561P49447 251 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 UBE2G2P60604 165 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 RAB1AP62820 205 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 PLP2Q04941 152 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 MPPED2Q15777 294 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 PRR31Q5SQ13 230 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 HIST2H3PS2Q5TEC6 136 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 FAM166AQ6J272 317 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 LPCAT3Q6P1A2 487 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms