RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CYGBQ8WWM9 190 aa13.46□□□□□ -0.25
PDLIM7-215ENST00000506161 TMEM133Q9H2Q1 129 aa13.46□□□□□ -0.25
PDLIM7-215ENST00000506161 ZNF286AQ9HBT8 521 aa13.46□□□□□ -0.25
PDLIM7-215ENST00000506161 NOTCH1P46531 2555 aa13.46□□□□□ -0.26
PDLIM7-215ENST00000506161 PLXNB1O43157 2135 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 TRAV24A0A0B4J272 114 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 hCG_1809904A0A1W2PP81 198 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 A0A1W2PPE2 198 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 A0A1W2PR64 198 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 A0A1W2PRV1 198 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 SH2D1BO14796 132 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 OGG1O15527 345 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 CCDC159P0C7I6 412 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 CGB3P0DN86 165 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 CGB7P0DN87 165 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 CD24P25063 80 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 RPS11P62280 158 aaKnown RBP eCLIP13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 TMEM95Q3KNT9 176 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 PIGYQ3MUY2 71 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 TRAPPC6BQ86SZ2 158 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 C10orf67Q8IYJ2 551 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 GGHQ92820 318 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 CORO2AQ92828 525 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 MALSU1Q96EH3 234 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 RDH12Q96NR8 316 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 SERTAD4Q9NUC0 356 aa13.45□□□□□ -0.26
PDLIM7-215ENST00000506161 TRAV39A0A0B4J263 110 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 A0A1W2PP11 408 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 XPNPEP2O43895 674 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 CDRT1O95170 752 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 OCM2P0CE71 109 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 OCMP0CE72 109 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 CDK2P24941 298 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 SATL1Q86VE3 508 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 LYG1Q8N1E2 194 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 KLHDC1Q8N7A1 406 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 OR5D14Q8NGL3 314 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 OR13A1Q8NGR1 328 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 TNFAIP8L1Q8WVP5 186 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 MRPL48Q96GC5 212 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 PGLYRP3Q96LB9 341 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 NR1H4Q96RI1 486 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 CLEC7AQ9BXN2 247 aa13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 DIMT1Q9UNQ2 313 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 UBE2J1Q9Y385 318 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-215ENST00000506161 TRAV8-7A0A075B6U6 113 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 TRBV5-5A0A0J9YX44 114 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 ODAMA1E959 279 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 H0YJX3 145 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 CSN2P05814 226 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 RPSAP08865 295 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 RAB3AP20336 220 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 DCKP27707 260 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 BLCAPP62952 87 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 MRPL28Q13084 256 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 KRBOX4Q5JUW0 171 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 ELP2Q6IA86 826 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 FAM53AQ6NSI3 398 aaPredicted RBP13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 RPL22L1Q6P5R6 122 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 ASCL4Q6XD76 172 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 Q8NFD4 153 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 PXT1Q8NFP0 134 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 OR4C13Q8NGP0 309 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 WIPF2Q8TF74 440 aaPredicted RBP13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 CFHR4Q92496 578 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 STMN2Q93045 179 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 TMEM106AQ96A25 262 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 CDCA4Q9BXL8 241 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 KIF25Q9UIL4 384 aa13.43□□□□□ -0.26
PDLIM7-215ENST00000506161 M0QZ24 198 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 TIMM23O14925 209 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 DEGS1O15121 323 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 IGLV1-47P01700 117 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 IGHV3-7P01780 117 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 IGFBP3P17936 291 aaPredicted RBP13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 MTNR1BP49286 362 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 OGFRL1Q5TC84 451 aaPredicted RBP13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 DMKNQ6E0U4 476 aaPredicted RBP13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 HEPN1Q6WQI6 88 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 C1QL4Q86Z23 238 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 Q8N2B8 174 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 ABHD12Q8N2K0 398 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 OR51T1Q8NGJ9 327 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 FAM110DQ8TAY7 271 aaPredicted RBP13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 NDNFQ8TB73 568 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 GPR148Q8TDV2 347 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 FBLIM1Q8WUP2 373 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 LEAP2Q969E1 77 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 FOXRED1Q96CU9 486 aaPredicted RBP13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 SMIM19Q96E16 107 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 MMP27Q9H306 513 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 RANBP3Q9H6Z4 567 aaPredicted RBP13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 BABAM2Q9NXR7 383 aa13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 NKX1-2Q9UD57 310 aaPredicted RBP13.42□□□□□ -0.26
PDLIM7-215ENST00000506161 TRGV10A0A0A0MS01 117 aa13.41□□□□□ -0.26
PDLIM7-215ENST00000506161 PNMA8CA0A1B0GUJ8 204 aa13.41□□□□□ -0.26
PDLIM7-215ENST00000506161 A0A1W2PPK0 400 aa13.41□□□□□ -0.26
PDLIM7-215ENST00000506161 SH2D7A6NKC9 451 aaPredicted RBP13.41□□□□□ -0.26
PDLIM7-215ENST00000506161 FAM90A22PA8MWA6 464 aa13.41□□□□□ -0.26
PDLIM7-215ENST00000506161 VSIG10L2P0DP72 767 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms