RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 RSL24D1Q9UHA3 163 aaKnown RBP6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 RABL2BQ9UNT1 228 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 ITGB1BP1O14713 200 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 GYPAP02724 150 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 POU3F4P49335 361 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR5D13Q8NGL4 314 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR5H6Q8NGV6 325 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 MRPL30Q8TCC3 161 aaKnown RBP6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 RFPL4AA6NLU0 287 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 RFPL4AL1F8VTS6 287 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 DVL1O14640 695 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 MGST3O14880 152 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 GEMIN2O14893 280 aaKnown RBP6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 MAGEB3O15480 346 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 SUMF2Q8NBJ7 301 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 PLPPR1Q8TBJ4 325 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 EMG1Q92979 244 aaKnown RBP6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 DCSTAMPQ9H295 470 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 SPACA1Q9HBV2 294 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 RPUSD1Q9UJJ7 312 aaKnown RBP6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 RBMX2Q9Y388 322 aaKnown RBP6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 N6AMT1Q9Y5N5 214 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 KPTNQ9Y664 436 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 LINC00312Q9Y6C7 94 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 FASNP49327 2511 aaKnown RBP6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 PDCD6O75340 191 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 IRF2P14316 349 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 ARSBP15848 533 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 ZNF137PP52743 207 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 RTN4RL2Q86UN3 420 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 ZNF439Q8NDP4 499 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 NICN1Q9BSH3 213 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 CABLES2Q9BTV7 478 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 SSBP3Q9BWW4 388 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 KCNK15Q9H427 330 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 UFSP2Q9NUQ7 469 aa6.82□□□□□ -1.32
CDC42SE2-208ENST00000505065 DOCK11Q5JSL3 2073 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 IGHV3OR15-7A0A075B7D8 119 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 H3BSH0 61 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 SH2D1BO14796 132 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 HEXAP06865 529 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 INHBBP09529 407 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 GZMKP49863 264 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 P2RX3P56373 397 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 FAM189A2Q15884 450 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 PNLIPRP3Q17RR3 467 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 MOGAT2Q3SYC2 334 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 AWAT2Q6E213 333 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR52M1Q8NGK5 317 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 NPRL2Q8WTW4 380 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 RAB40AQ8WXH6 277 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 RFT1Q96AA3 541 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 PECRQ9BY49 303 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 CST11Q9H112 138 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 EXOSC4Q9NPD3 245 aaKnown RBP6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 B4DSR2 109 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 XRCC3O43542 346 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 ORC5O43913 435 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 SSX5O60225 188 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 LIPFP07098 398 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 MSMBP08118 114 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 PRKACAP17612 351 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 RORCP51449 518 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 DMRTC1Q5HYR2 192 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 FGFRL1Q8N441 504 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 FAM216BQ8N7L0 139 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR8B3Q8NGG8 313 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 LGALS14Q8TCE9 139 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 MSI2Q96DH6 328 aaKnown RBP6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 C18orf12Q96KH6 178 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR8B2Q96RD0 313 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 OCSTAMPQ9BR26 566 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 DPCDQ9BVM2 203 aaPredicted RBP6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 ST3GAL6Q9Y274 331 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 ZANQ9Y493 2812 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 LY6LH3BQJ8 138 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 GSTZ1O43708 216 aaPredicted RBP6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 FOXH1O75593 365 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 APOA1P02647 267 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 PITPNBP48739 271 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 LOXL3P58215 753 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 CD276Q5ZPR3 534 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR51D1Q8NGF3 324 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR10R2Q8NGX6 335 aa6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 ZNF107Q9UII5 783 aaPredicted RBP6.81□□□□□ -1.32
CDC42SE2-208ENST00000505065 VGLL3A8MV65 326 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 PPIHO43447 177 aaKnown RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 NXPH2O95156 264 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 MT-ND4P03905 459 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 GSTP1P09211 210 aaKnown RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 SLC36A1Q7Z2H8 476 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 CCDC190Q86UF4 302 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 CLVS1Q8IUQ0 354 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 LINC00311Q8N616 119 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR11H6Q8NGC7 330 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 NKX6-3A6NJ46 265 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 SLC2A2P11168 524 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 FUT3P21217 361 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 DTYMKP23919 212 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 RSU1Q15404 277 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms