RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 Q6ZSR6 202 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 RFESDQ8TAC1 157 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 ULBP2Q9BZM5 246 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 SONP18583 2426 aaKnown RBP6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 IGHV2-70P01814 119 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 HKR1P10072 659 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 CRISP2P16562 243 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 HOXA5P20719 270 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 SULT1A2P50226 295 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 GAS1P54826 345 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 PPP1CBP62140 327 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 LSM6P62312 80 aaKnown RBP6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 EWSR1Q01844 656 aaKnown RBP eCLIP6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 EDDM3AQ14507 147 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 ZNF776Q68DI1 518 aaPredicted RBP6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 VN1R4Q7Z5H5 301 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 ZNF664Q8N3J9 261 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 MFSD9Q8NBP5 474 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 TIMP4Q99727 224 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 PLEKHA2Q9HB19 425 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 PITPNC1Q9UKF7 332 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 GPR34Q9UPC5 381 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 PIAS3Q9Y6X2 628 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 CTDSPLO15194 276 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 ZNF253O75346 499 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 OR5G3P0C626 314 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 COX5BP10606 129 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 ARHGAP19Q14CB8 494 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 TMEM183BQ1AE95 376 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 OR4A47Q6IF82 309 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 FAM19A2Q8N3H0 131 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 OR1P1Q8NH06 330 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 HIST1H2BLQ99880 126 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 PMCHL2Q9BQD1 86 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 RAB18Q9NP72 206 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 TRAPPC2LQ9UL33 140 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 SCN8AQ9UQD0 1980 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 NUP210Q8TEM1 1887 aaPredicted RBP6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 TMEM265A0A087WTH1 108 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 A0A087WUJ7 227 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 NPIPB9F8W1W9 429 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 ZNF17P17021 662 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 PLAURQ03405 335 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 PIGYQ3MUY2 71 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 SPATA46Q5T0L3 261 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 OR13G1Q8NGZ3 307 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 SGMS2Q8NHU3 365 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 ADAMTS17Q8TE56 1095 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 RNF128Q8TEB7 428 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 PCED1AQ9H1Q7 454 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 HEYLQ9NQ87 328 aaPredicted RBP6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 NECAP2Q9NVZ3 263 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 NAGKQ9UJ70 344 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 CDC14BO60729 498 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 CHRM2P08172 466 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 SLC25A6P12236 298 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 ZNF708P17019 499 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 CBLN1P23435 193 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 PPICP45877 212 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 SLC35D3Q5M8T2 416 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 ALKBH3Q96Q83 286 aaPredicted RBP6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 RNF126Q9BV68 326 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 PSENENQ9NZ42 101 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 SEMA5BQ9P283 1151 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 R4GMQ9 66 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 TET1Q8NFU7 2136 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 VPS13AQ96RL7 3174 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 A0A1W2PRD5 423 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 A0A1W2PRF3 423 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 A0A1W2PRM7 423 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 A8MXE2 369 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 TMEM127O75204 238 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 CCL5P13501 91 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 USF1P22415 310 aaPredicted RBP6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 TM4SF20Q53R12 229 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 LDLRAD2Q5SZI1 272 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 UNQ5815/PRO19632Q6UWF5 114 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 DMBX1Q8NFW5 382 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 SLC37A2Q8TED4 501 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 PSMF1Q92530 271 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 ALX4Q9H161 411 aaPredicted RBP6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 HIPK2Q9H2X6 1198 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 FAM60AQ9NP50 221 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 CACNG5Q9UF02 275 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 ADAM29Q9UKF5 820 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 MYO16Q9Y6X6 1858 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 IGLV3-16A0A075B6K0 115 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 TRAV36DV7A0A075B6V5 113 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 LOC102723971A0A1B0GUV8 181 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 DEFB108AA8MXU0 73 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 NUDT19A8MXV4 375 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 HPRT1P00492 218 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 LINC00271P0C7V0 271 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 IRF2P14316 349 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 HOXB9P17482 250 aaPredicted RBP6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 PTGER4P35408 488 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 PPOXP50336 477 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 ADPRHP54922 357 aa6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 TRA2BP62995 288 aaKnown RBP6.86□□□□□ -1.31
ATP2C1-208ENST00000504948 STPG3Q8N7X2 389 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms