RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 ZNF747Q9BV97 191 aa17.25■□□□□ 0.35
TRAPPC11-203ENST00000504526 CDCA4Q9BXL8 241 aa17.25■□□□□ 0.35
TRAPPC11-203ENST00000504526 ANKRD60Q9BZ19 345 aa17.25■□□□□ 0.35
TRAPPC11-203ENST00000504526 PCDHB16Q9NRJ7 776 aa17.25■□□□□ 0.35
TRAPPC11-203ENST00000504526 PAK1IP1Q9NWT1 392 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-203ENST00000504526 IL36GQ9NZH8 169 aa17.25■□□□□ 0.35
TRAPPC11-203ENST00000504526 VPREB3Q9UKI3 123 aa17.25■□□□□ 0.35
TRAPPC11-203ENST00000504526 TPRKBQ9Y3C4 175 aa17.25■□□□□ 0.35
TRAPPC11-203ENST00000504526 MMP24Q9Y5R2 645 aa17.25■□□□□ 0.35
TRAPPC11-203ENST00000504526 TRGV10A0A0A0MS01 117 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 TRBV5-7A0A0A0MS05 114 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 PTGES3LE9PB15 166 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 MYF6P23409 242 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 COX7A1P24310 79 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 SCN1BQ07699 218 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 AANATQ16613 207 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 TRAPPC6BQ86SZ2 158 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 METTL9Q9H1A3 318 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 MEGF9Q9H1U4 602 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 GAL3ST2Q9H3Q3 398 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 BEX1Q9HBH7 125 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 C1RLQ9NZP8 487 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 FOXJ3Q9UPW0 622 aa17.24■□□□□ 0.35
TRAPPC11-203ENST00000504526 PNMA8CA0A1B0GUJ8 204 aa17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 SLC33A1O00400 549 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 ZNF780AO75290 641 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 MAPK3P27361 379 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 TGFBR2P37173 567 aa17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 RAG2P55895 527 aa17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 TAF9Q16594 264 aa17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 SHISA2Q6UWI4 295 aa17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 OR11H6Q8NGC7 330 aa17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 CORO2AQ92828 525 aa17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 OR14A2Q96R54 314 aa17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 PPA2Q9H2U2 334 aa17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 TAS2R3Q9NYW6 316 aa17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 TBL2Q9Y4P3 447 aaKnown RBP17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 SESN1Q9Y6P5 492 aa17.23■□□□□ 0.35
TRAPPC11-203ENST00000504526 HTR3BO95264 441 aa17.22■□□□□ 0.35
TRAPPC11-203ENST00000504526 CSTBP04080 98 aaKnown RBP17.22■□□□□ 0.35
TRAPPC11-203ENST00000504526 OR3A4PP47883 348 aa17.22■□□□□ 0.35
TRAPPC11-203ENST00000504526 NHLRC3Q5JS37 347 aa17.22■□□□□ 0.35
TRAPPC11-203ENST00000504526 CDH26Q8IXH8 852 aa17.22■□□□□ 0.35
TRAPPC11-203ENST00000504526 MS4A15Q8N5U1 240 aa17.22■□□□□ 0.35
TRAPPC11-203ENST00000504526 NR1H4Q96RI1 486 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC11-203ENST00000504526 ZNF184Q99676 751 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC11-203ENST00000504526 ING4Q9UNL4 249 aa17.22■□□□□ 0.35
TRAPPC11-203ENST00000504526 MEX3AA1L020 520 aaKnown RBP17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 FAM90A8PA6NJQ4 464 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 ODF3BA8MYP8 253 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 CLPXO76031 633 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 MDKP21741 143 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 KCNJ3P48549 501 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 SLC35A2P78381 396 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 AESQ08117 197 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 DOC2BQ14184 412 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 GPR176Q14439 515 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 SPHARQ15513 63 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 LRRC75BQ2VPJ9 315 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 KRBOX4Q5JUW0 171 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 ZNF626Q68DY1 528 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 OR52W1Q6IF63 320 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 IZUMO2Q6UXV1 221 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 OR10K1Q8NGX5 313 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 FOXRED1Q96CU9 486 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 ORAI1Q96D31 301 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 AJUBAQ96IF1 538 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 DERL3Q96Q80 235 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 OR6C3Q9NZP0 311 aa17.21■□□□□ 0.35
TRAPPC11-203ENST00000504526 TRAV8-7A0A075B6U6 113 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 ODAMA1E959 279 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 CDRT1O95170 752 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 ARG1P05089 322 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 OMGP23515 440 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 GLIPR1P48060 266 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 PAN3Q58A45 887 aaKnown RBP17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 LINC00596Q86U02 117 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 OSR2Q8N2R0 312 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 C17orf50Q8WW18 174 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 SSX3Q99909 188 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 SLITRK2Q9H156 845 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 TMEM133Q9H2Q1 129 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 NCOR1P1Q9H4R4 102 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 DUSP21Q9H596 190 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 DSCAML1Q8TD84 2053 aa17.2■□□□□ 0.34
TRAPPC11-203ENST00000504526 H3BUX3 64 aa17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 RELBQ01201 579 aa17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 DYNC1I2Q13409 638 aaKnown RBP17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 GPR50Q13585 617 aa17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 IRF3Q14653 427 aa17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 ATXN7L3Q14CW9 347 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 DHRS7BQ6IAN0 325 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 HEPN1Q6WQI6 88 aa17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 NKAIN3Q8N8D7 197 aa17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 SGMS2Q8NHU3 365 aa17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 TAF15Q92804 592 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 MALSU1Q96EH3 234 aa17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 COQ2Q96H96 371 aa17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 CLEC7AQ9BXN2 247 aa17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 BARHL1Q9BZE3 327 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms