RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PSPNO60542 156 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A15PP0C7V4 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A13PP0C7W8 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A14PP0C7W9 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A24PP0C7X0 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 MGMTP16455 207 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 OR10A3P58181 314 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 QRFPP83859 136 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 RAB11BQ15907 218 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 MPV17LQ2QL34 196 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 CR1LQ2VPA4 569 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAHD2BQ6P2I3 314 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 BTNL3Q6UXE8 466 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 NR2C2APQ86WQ0 139 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 TMEM104Q8NE00 496 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 KCNG3Q8TAE7 436 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 H1FXQ92522 213 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAHD2AQ96GK7 314 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 TMPRSS13Q9BYE2 586 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 CST11Q9H112 138 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 RNF167Q9H6Y7 350 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 NOTOA8MTQ0 251 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 TMEM14DPA8MWL7 114 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 SIRPB1O00241 398 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 SLC33A1O00400 549 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 MGST3O14880 152 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 CRTAPO75718 401 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 CSN2P05814 226 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 ZNF44P15621 663 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 ARSBP15848 533 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 GABRR1P24046 479 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 SDC2P34741 201 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 OR3A1P47881 315 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 SCN1BQ07699 218 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 GDPD3Q7L5L3 318 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 OR2W3Q7Z3T1 314 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 ANKRD13BQ86YJ7 626 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 OR4S1Q8NGB4 309 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 FAM3DQ96BQ1 224 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 Q96M66 194 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 SELENOIQ9C0D9 397 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 BANF2Q9H503 90 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 C7orf69Q9H7B7 122 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 FBLN5Q9UBX5 448 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 STEAP1Q9UHE8 339 aa9.83□□□□□ -0.84
PDLIM5-208ENST00000504489 TRAV24A0A0B4J272 114 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 H3BUI4 141 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 AIPO00170 330 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 GEMIN2O14893 280 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 OR7C1O76099 320 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 MPIG6BO95866 241 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 PPIAL4GP0DN37 164 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 ERP29P30040 261 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 RPL5P46777 297 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 RPL31P62899 125 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 UNC119Q13432 240 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 PDCD1Q15116 288 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 P2RY14Q15391 338 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 GRK1Q15835 563 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 TAF9Q16594 264 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 C2orf76Q3KRA6 126 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 FAM120AOSQ5T036 256 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 HES5Q5TA89 166 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 OR10K2Q6IF99 312 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 SLC16A12Q6ZSM3 486 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 GPR141Q7Z602 305 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 TEX29Q8N6K0 151 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 KIR3DL3Q8N743 410 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 OR51D1Q8NGF3 324 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 FAM46BQ96A09 425 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 MRI1Q9BV20 369 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 TMEM59Q9BXS4 323 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 CHST6Q9GZX3 395 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 SPACA1Q9HBV2 294 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 LPAR3Q9UBY5 353 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 OPN4Q9UHM6 478 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 SCOCQ9UIL1 159 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 AUP1Q9Y679 476 aa9.82□□□□□ -0.84
PDLIM5-208ENST00000504489 ANK3Q12955 4377 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 MXRA5Q9NR99 2828 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 FUOMA2VDF0 154 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 INAFM1C9JVW0 142 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 LDLRAD4O15165 306 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 GABARAPO95166 117 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 CLEC2LP0C7M8 214 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 HNF1AP20823 631 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 KCNJ3P48549 501 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 CLDN12P56749 244 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 RPS27AP62979 156 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 PAX5Q02548 391 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 MEF2CQ06413 473 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 PAN3Q58A45 887 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 C1orf229Q6ZS94 237 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 SUMF2Q8NBJ7 301 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 TM2D1Q9BX74 207 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 PPA2Q9H2U2 334 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 C19orf12Q9NSK7 152 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 ZNF581Q9P0T4 197 aa9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 RCC2Q9P258 522 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-208ENST00000504489 CDC42EP3Q9UKI2 254 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms