RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PLXNB3Q9ULL4 1909 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 A0A087WX48 190 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 TRAV34A0A0B4J273 112 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 CBY3A6NI87 242 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 PYCARD-AS1I3L0S3 204 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 HSD17B6O14756 317 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 P2RX6O15547 441 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 CST7O76096 145 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ZNF205O95201 554 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 MYF5P13349 255 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 HOXB9P17482 250 aaPredicted RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 KITLGP21583 273 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 RAB5CP51148 216 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 LIM2P55344 173 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 SCAND1P57086 179 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 LINC00310P59036 64 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 DUSP2Q05923 314 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 BAXQ07812 192 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ZNF74Q16587 644 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 PRTGQ2VWP7 1150 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ARHGAP11BQ3KRB8 267 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 VWA2Q5GFL6 755 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 COA6Q5JTJ3 125 aaKnown RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 MFSD12Q6NUT3 480 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 NIPAL3Q6P499 406 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 LSRQ86X29 649 aaPredicted RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ETFBKMTQ8IXQ9 262 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ARIH2OSQ8N7S6 290 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ZFP62Q8NB50 900 aaPredicted RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 CLEC1AQ8NC01 280 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 OR5K2Q8NHB8 316 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 SNIP1Q8TAD8 396 aaKnown RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 OR51E1Q8TCB6 317 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 NUP210Q8TEM1 1887 aaPredicted RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 TAAR8Q969N4 342 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 APOBEC3DQ96AK3 386 aaPredicted RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 KCTD12Q96CX2 325 aaKnown RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 SDF2Q99470 211 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 PLA2G2FQ9BZM2 168 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 RAB1BQ9H0U4 201 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 OR10A2Q9H208 303 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 LMAN1LQ9HAT1 526 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 GPR35Q9HC97 309 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 RNF114Q9Y508 228 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ENTPD2Q9Y5L3 495 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 SMG1Q96Q15 3661 aaKnown RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 A0A0J9YY10 115 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 CLEC18AA5D8T8 446 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 OR5H15A6NDH6 313 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 OR5H1A6NKK0 313 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 AQP7P3A6NL99 342 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ZAR1LA6NP61 321 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 UMAD1C9J7I0 102 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 TRAPPC2LH3BP13 241 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 TGOLN2O43493 480 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ANGPTL7O43827 346 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 OR2C1O95371 312 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 DDAH2O95865 285 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 CD160O95971 181 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 HPNP05981 417 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ZNF728P0DKX0 622 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 FCER1GP30273 86 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 SNCAP37840 140 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 EDDM3BP56851 147 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 RIPPLY3P57055 190 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 RPS20P60866 119 aaKnown RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ERVK-16P61578 105 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 DMWDQ09019 674 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 C2orf76Q3KRA6 126 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 TMEM177Q53S58 311 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 SPANXN5Q5MJ07 72 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 CLEC18BQ6UXF7 455 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 LINC00696Q6ZRV3 163 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 MDGA2Q7Z553 956 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 FAM169BQ8N8A8 192 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 CLEC18CQ8NCF0 446 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 DEFB108BQ8NET1 73 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 SEMA6DQ8NFY4 1073 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 TMEM37Q8WXS4 190 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 C8orf44Q96CB5 159 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 GABARAPL1Q9H0R8 117 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 CALHM2Q9HA72 323 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 IL21Q9HBE4 155 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 PRR13Q9NZ81 148 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 MRPL27Q9P0M9 148 aaKnown RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 PSG8Q9UQ74 426 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 TCF20Q9UGU0 1960 aaKnown RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 PTPRDP23468 1912 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 TMED7-TICAM2A0A0A6YYA0 188 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 TMEM212A6NML5 194 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 HCRTR1O43613 425 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 FGF17O60258 216 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 ABHD16AO95870 558 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 CST4P01036 141 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 IGHG1P01857 330 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 GRPP07492 148 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 NHLRC4P0CG21 123 aaPredicted RBP3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 IAPPP10997 89 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 CD1BP29016 333 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 CD1CP29017 333 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms