RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 MST1LQ2TV78 715 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 CHRFAM7AQ494W8 412 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 RSBN1Q5VWQ0 802 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 ZNF826PQ6ZT77 177 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 DTX2Q86UW9 622 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 BPIFB2Q8N4F0 458 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 GCSAMQ8N6F7 178 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 GVQW1Q8N7I0 195 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 OR5AP2Q8NGF4 316 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 OR5D13Q8NGL4 314 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 LILRB1Q8NHL6 650 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 NEU4Q8WWR8 484 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 HS3ST6Q96QI5 342 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 RAB1BQ9H0U4 201 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 DNTTIP1Q9H147 329 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 NECAP2Q9NVZ3 263 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 ELF5Q9UKW6 265 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 WIPI2Q9Y4P8 454 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 TRAV38-1A0A0B4J264 116 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 IGHV3-64DA0A0J9YX35 117 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 RFPL4AA6NLU0 287 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 OR2AT4A6NND4 320 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 RFPL4AL1F8VTS6 287 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 INMT-MINDY4F8WBC2 141 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 SLC33A1O00400 549 aaPredicted RBP6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 NDUFA2O43678 99 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 DIRAS3O95661 229 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 NAPSAO96009 420 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 AMY2AP04746 511 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 DUSP1P28562 367 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 PRDX2P32119 198 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 TSPAN5P62079 268 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 CCL8P80075 99 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 CDK10Q15131 360 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 SURF2Q15527 256 aaPredicted RBP6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 TEX36Q5VZQ5 186 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 SLC35E4Q6ICL7 350 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 TRAT1Q6PIZ9 186 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 MEX3BQ6ZN04 569 aaKnown RBP6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 ZNF554Q86TJ5 538 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 BATF2Q8N1L9 274 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 GAPTQ8N292 157 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 ZNF561Q8N587 486 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 CCDC107Q8WV48 283 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 RDH5Q92781 318 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 NEUROG1Q92886 237 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 SNAPC3Q92966 411 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 SNX22Q96L94 193 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 FAM234AQ9H0X4 552 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 PPA2Q9H2U2 334 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 NCOR1P1Q9H4R4 102 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 TMEM165Q9HC07 324 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 Q9N2K0 584 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 RAB9BQ9NP90 201 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 DLL4Q9NR61 685 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 TMEM106BQ9NUM4 274 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 IL36RNQ9UBH0 155 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 OR14J1Q9UGF5 321 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 ANXA10Q9UJ72 324 aa6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 SPTBN1Q01082 2364 aaKnown RBP6.84□□□□□ -1.31
TOPBP1-202ENST00000503338 PPIAL4EA0A075B759 164 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 IGHV1-69-2A0A0G2JMI3 117 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 TMEM30CPA0ZSE6 113 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 OOEPA6NGQ2 149 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 NKX6-3A6NJ46 265 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 TRDCB7Z8K6 153 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 PPIAL4DF5H284 164 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 TMEM178BH3BS89 294 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 M0QYG6 137 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 LGALS8O00214 317 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 SIRPB1O00241 398 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 WNT9BO14905 357 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 PEX14O75381 377 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 PMP2P02689 132 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 H2AFB2P0C5Z0 115 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 PPIAL4FP0DN26 164 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 PSG2P11465 335 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 SPNP16150 400 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 GLP1RP43220 463 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 MECP2P51608 486 aaKnown RBP6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 GMFBP60983 142 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 COL10A1Q03692 680 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 PDCD1Q15116 288 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 HFEQ30201 348 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 C6orf183Q5T699 404 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 ATPAF1Q5TC12 328 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 SFRP4Q6FHJ7 346 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 OR52W1Q6IF63 320 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF880Q6PDB4 577 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF497Q6ZNH5 498 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 IDO2Q6ZQW0 420 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 OVCH2Q7RTZ1 564 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 PEG10Q86TG7 708 aaKnown RBP6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 ZDHHC22Q8N966 263 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 OR4S1Q8NGB4 309 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 OR51S1Q8NGJ8 323 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 OR6F1Q8NGZ6 308 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 TERB2Q8NHR7 220 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 UPRTQ96BW1 309 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 PPP1R14BQ96C90 147 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms