RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 SLC22A5O76082 557 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 NXPH2O95156 264 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 IL13RA1P78552 427 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 SPIN3Q5JUX0 258 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 FIP1L1Q6UN15 594 aaKnown RBP18.66■□□□□ 0.58
PTPN13-205ENST00000502971 C22orf34Q6ZV56 151 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 C11orf53Q8IXP5 236 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 NEK7Q8TDX7 302 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 MITD1Q8WV92 249 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 DPCDQ9BVM2 203 aaPredicted RBP18.66■□□□□ 0.58
PTPN13-205ENST00000502971 CHIAQ9BZP6 476 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 HES4Q9HCC6 221 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 Q9N2K0 584 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 ESPL1Q14674 2120 aa18.65■□□□□ 0.58
PTPN13-205ENST00000502971 TRBV6-6A0A0A6YYG2 114 aa18.65■□□□□ 0.58
PTPN13-205ENST00000502971 FAM172BPA6NC97 362 aa18.65■□□□□ 0.58
PTPN13-205ENST00000502971 DNASE1P24855 282 aa18.65■□□□□ 0.58
PTPN13-205ENST00000502971 ZNF146Q15072 292 aa18.65■□□□□ 0.58
PTPN13-205ENST00000502971 MSMPQ1L6U9 139 aa18.65■□□□□ 0.58
PTPN13-205ENST00000502971 Q6ZPA2 131 aa18.65■□□□□ 0.58
PTPN13-205ENST00000502971 RTBDNQ9BSG5 229 aaPredicted RBP18.65■□□□□ 0.58
PTPN13-205ENST00000502971 DUSP13Q9UII6 198 aa18.65■□□□□ 0.58
PTPN13-205ENST00000502971 NBEAQ8NFP9 2946 aa18.64■□□□□ 0.57
PTPN13-205ENST00000502971 POM121CA8CG34 1229 aa18.64■□□□□ 0.57
PTPN13-205ENST00000502971 ZNF44P15621 663 aa18.64■□□□□ 0.57
PTPN13-205ENST00000502971 PTAFRP25105 342 aa18.64■□□□□ 0.57
PTPN13-205ENST00000502971 CA7P43166 264 aa18.64■□□□□ 0.57
PTPN13-205ENST00000502971 KLF3P57682 345 aaPredicted RBP18.64■□□□□ 0.57
PTPN13-205ENST00000502971 C2orf68Q2NKX9 166 aa18.64■□□□□ 0.57
PTPN13-205ENST00000502971 TMEM108Q6UXF1 575 aa18.64■□□□□ 0.57
PTPN13-205ENST00000502971 TMEM171Q8WVE6 324 aa18.64■□□□□ 0.57
PTPN13-205ENST00000502971 PHB2Q99623 299 aa18.64■□□□□ 0.57
PTPN13-205ENST00000502971 WDR13Q9H1Z4 485 aa18.64■□□□□ 0.57
PTPN13-205ENST00000502971 IGLV3-9A0A075B6K5 115 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 ATP6V1G2-DDX39BF2Z307 99 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 HS3ST1O14792 307 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 ATXN7O15265 892 aaPredicted RBP18.63■□□□□ 0.57
PTPN13-205ENST00000502971 DUS4LO95620 317 aaKnown RBP18.63■□□□□ 0.57
PTPN13-205ENST00000502971 PPP3CBP16298 524 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 MDH2P40926 338 aaKnown RBP18.63■□□□□ 0.57
PTPN13-205ENST00000502971 CD200P41217 278 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 LPCAT3Q6P1A2 487 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 C11orf88Q6PI97 169 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 MGAT4AQ9UM21 535 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 C14orf166Q9Y224 244 aaKnown RBP18.63■□□□□ 0.57
PTPN13-205ENST00000502971 PRR14LQ5THK1 2151 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 HSPB6O14558 160 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 SH2D1BO14796 132 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 PGAM2P15259 253 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 VAMP1P23763 118 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 H2BFSP57053 126 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 SHEQ5VZ18 495 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 LRP11Q86VZ4 500 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 NUP37Q8NFH4 326 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 RDH5Q92781 318 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 TMEM230Q96A57 120 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 TREM2Q9NZC2 230 aa18.63■□□□□ 0.57
PTPN13-205ENST00000502971 PAIP2BQ9ULR5 123 aaKnown RBP18.63■□□□□ 0.57
PTPN13-205ENST00000502971 KIR2DS1A0A191URI9 304 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 A6NLC8 198 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 RGS11O94810 467 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 CTSDP07339 412 aaPredicted RBP18.62■□□□□ 0.57
PTPN13-205ENST00000502971 HLA-GP17693 338 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 GLP1RP43220 463 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 KIR2DS4P43632 304 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 SELENOVP59797 346 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 BAMBIQ13145 260 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 KIR2DS1Q14954 304 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 PRAMEF6Q5VXH4 476 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 WDR82Q6UXN9 313 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 OR2Z1Q8NG97 314 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 OR11H4Q8NGC9 324 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 PLSCR3Q9NRY6 295 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 OPN4Q9UHM6 478 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 GLS2Q9UI32 602 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 BOLA1Q9Y3E2 137 aa18.62■□□□□ 0.57
PTPN13-205ENST00000502971 HEATR1Q9H583 2144 aaKnown RBP18.62■□□□□ 0.57
PTPN13-205ENST00000502971 IGHV3-64DA0A0J9YX35 117 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 G3V3Q6 166 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 H7C1Q1 480 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 SIX6O95475 246 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 SFT2D2O95562 160 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 PTBP3O95758 552 aaKnown RBP18.61■□□□□ 0.57
PTPN13-205ENST00000502971 OR2H2O95918 312 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 GLRA1P23415 457 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 IFITM2Q01629 132 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 LAMTOR1Q6IAA8 161 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 LIN54Q6MZP7 749 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 WFDC8Q8IUA0 241 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 C9orf62Q8N4C0 152 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 MRPL30Q8TCC3 161 aaKnown RBP18.61■□□□□ 0.57
PTPN13-205ENST00000502971 CLEC4MQ9H2X3 399 aaPredicted RBP18.61■□□□□ 0.57
PTPN13-205ENST00000502971 ATP23Q9Y6H3 246 aa18.61■□□□□ 0.57
PTPN13-205ENST00000502971 A0A0B4J2A0 478 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 PLSCR5A0PG75 271 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 TRDCB7Z8K6 153 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 SLC33A1O00400 549 aaPredicted RBP18.6■□□□□ 0.57
PTPN13-205ENST00000502971 PAN3Q58A45 887 aaKnown RBP18.6■□□□□ 0.57
PTPN13-205ENST00000502971 ZNF880Q6PDB4 577 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 VHLLQ6RSH7 139 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms