RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 HRASLS5Q96KN8 279 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 APOL4Q9BPW4 351 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 ABCG5Q9H222 651 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 AMMECR1Q9Y4X0 333 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-236ENST00000498808 R4GMQ9 66 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 FUOMA2VDF0 154 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 CCDC182A6NF36 153 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 H3BSH0 61 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 J3QR06 171 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 IGHG4P01861 327 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 GP9P14770 177 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 SPIN3Q5JUX0 258 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 OR2T5Q6IEZ7 315 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 CYP2R1Q6VVX0 501 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 ZNF429Q86V71 674 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 TGIF2LXQ8IUE1 241 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 OR8H3Q8N146 312 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 OR2T29Q8NH02 315 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 LEAP2Q969E1 77 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 BORCS8Q96FH0 119 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 FEVQ99581 238 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 GON7Q9BXV9 100 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 REEP1Q9H902 201 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 LIN7CQ9NUP9 197 aaKnown RBP12.14□□□□□ -0.47
HDAC6-236ENST00000498808 ING3Q9NXR8 418 aa12.14□□□□□ -0.47
HDAC6-236ENST00000498808 ZNF729A6NN14 1252 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-236ENST00000498808 OR8U8P0C7N1 319 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 ATP6V1B2P21281 511 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 PSMB8P28062 276 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 POU3F4P49335 361 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 RAB7AP51149 207 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 MADCAM1Q13477 382 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 EBI3Q14213 229 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 Q8N9W7 124 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 MYOZ3Q8TDC0 251 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 CHST5Q9GZS9 411 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 GNB4Q9HAV0 340 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 PLEKHA1Q9HB21 404 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 HMG20AQ9NP66 347 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 EXOSC4Q9NPD3 245 aaKnown RBP12.13□□□□□ -0.47
HDAC6-236ENST00000498808 GSTK1Q9Y2Q3 226 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 TMEM14AQ9Y6G1 99 aa12.13□□□□□ -0.47
HDAC6-236ENST00000498808 NCBP2LA6PVI3 153 aaKnown RBP12.12□□□□□ -0.47
HDAC6-236ENST00000498808 SH2D1BO14796 132 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 LDLRAD4O15165 306 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 GATBO75879 557 aaKnown RBP12.12□□□□□ -0.47
HDAC6-236ENST00000498808 HMGN1P05114 100 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 CSN2P05814 226 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 CGB3P0DN86 165 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 CGB7P0DN87 165 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 CDK5Q00535 292 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 ODF4Q2M2E3 257 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 KRBOX4Q5JUW0 171 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 ZNF322Q6U7Q0 402 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-236ENST00000498808 Q8N6K4 173 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 EAF1Q96JC9 268 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-236ENST00000498808 PPIL3Q9H2H8 161 aaKnown RBP12.12□□□□□ -0.47
HDAC6-236ENST00000498808 PSG11Q9UQ72 335 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 SNX5Q9Y5X3 404 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 FRAS1Q86XX4 4008 aa12.12□□□□□ -0.47
HDAC6-236ENST00000498808 IGHV3-72A0A0B4J1Y9 119 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 KBTBD11-OT1A0A1B0GTJ5 212 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 TCRBV5S2A0A599 114 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 I3L521 148 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 RRP9O43818 475 aaKnown RBP12.11□□□□□ -0.47
HDAC6-236ENST00000498808 SAP30O75446 220 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 PRDX6P30041 224 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 CXCR4P61073 352 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 ZNF616Q08AN1 781 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 KIAA0141Q14154 515 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-236ENST00000498808 ATXN7L3Q14CW9 347 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-236ENST00000498808 SRSF7Q16629 238 aaKnown RBP eCLIP12.11□□□□□ -0.471e-6■■■□□ 17.2
HDAC6-236ENST00000498808 FAM53AQ6NSI3 398 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-236ENST00000498808 PGAM4Q8N0Y7 254 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 OR1N2Q8NGR9 330 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 GIPC3Q8TF64 312 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 DCUN1D4Q92564 292 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 HSPB9Q9BQS6 159 aa12.11□□□□□ -0.47
HDAC6-236ENST00000498808 MRM2Q9UI43 246 aaKnown RBP12.11□□□□□ -0.47
HDAC6-236ENST00000498808 IGKV1-12A0A0C4DH73 117 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 OVOL1O14753 267 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 IGKV1D-12P01611 117 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 RBP2P50120 134 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 GNB1P62873 340 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 RUNX1Q01196 453 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 TMEM236Q5W0B7 351 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 IZUMO1Q8IYV9 350 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 FAM71E2Q8N5Q1 922 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 HAVCR2Q8TDQ0 301 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 COMMD4Q9H0A8 199 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 KLK15Q9H2R5 256 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 MAGIXQ9H6Y5 334 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 PLSCR3Q9NRY6 295 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 OR6C3Q9NZP0 311 aa12.1□□□□□ -0.47
HDAC6-236ENST00000498808 IGHV1-3A0A0C4DH29 117 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 IGKV1-9A0A0C4DH69 117 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 SLC33A1O00400 549 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-236ENST00000498808 HSD17B6O14756 317 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 SYT7O43581 403 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 MPZL2O60487 215 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms