RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ACSF3Q4G176 576 aaPredicted RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 GGNBP1Q5YKI7 109 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 TMEM42Q69YG0 159 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 SPSB3Q6PJ21 355 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 HEPN1Q6WQI6 88 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 C1QL2Q7Z5L3 287 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 FAM219AQ8IW50 185 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 PRR22Q8IZ63 422 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 ZNF283Q8N7M2 679 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 LINC00469Q8N7U9 141 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 APCDD1LQ8NCL9 501 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 OR9K2Q8NGE7 335 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 OR8U1Q8NH10 309 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 OR1L3Q8NH93 324 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 OR51E1Q8TCB6 317 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 HAS2Q92819 552 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 MSI2Q96DH6 328 aaKnown RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 BSCL2Q96G97 398 aaPredicted RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 ARL5BQ96KC2 179 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 PRR25Q96S07 402 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 SULT4A1Q9BR01 284 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 TMEM59Q9BXS4 323 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 TBL1XR1Q9BZK7 514 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 TMEM231Q9H6L2 316 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 FBXL17Q9UF56 701 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 NSG2Q9Y328 171 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 VSTM2BA6NLU5 285 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 MARCH11A6NNE9 402 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 NPIPA2E9PIF3 369 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 H3BSH0 61 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 AP4M1O00189 453 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 MED6O75586 246 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 OR2C1O95371 312 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 MBPP02686 304 aaPredicted RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 CSN2P05814 226 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 EIF2S3P41091 472 aaKnown RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 GLP1RP43220 463 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 SNU13P55769 128 aaKnown RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 H3F3AP84243 136 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 FOXF1Q12946 379 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 ENDOGQ14249 297 aaKnown RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 SLC9A3R2Q15599 337 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 EXT1Q16394 746 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 GUK1Q16774 197 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 HIKESHIQ53FT3 197 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 Q6ZRG5 221 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 ODF3L1Q8IXM7 274 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 ZNF100Q8IYN0 542 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 BOLLQ8N9W6 283 aaKnown RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 LFNGQ8NES3 379 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 OR13C9Q8NGT0 318 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 NANPQ8TBE9 248 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 PP6455Q8WZ26 134 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 ERGIC1Q969X5 290 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 NABP1Q96AH0 204 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 MUCL1Q96DR8 90 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 CYYR1Q96J86 154 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 SUCNR1Q9BXA5 334 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 OR8D2Q9GZM6 311 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 VN1R1Q9GZP7 353 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 CHST5Q9GZS9 411 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 HRH4Q9H3N8 390 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 TMPRSS5Q9H3S3 457 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 LIME1Q9H400 295 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 FAM212BQ9NTI7 297 aaPredicted RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 PEMTQ9UBM1 199 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 DMRT1Q9Y5R6 373 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 F5P12259 2224 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 CEP192Q8TEP8 1941 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 TRAV1-1A0A0B4J248 108 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 BTBD17A6NE02 478 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 CXorf65A6NEN9 183 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 IFITM10A6NMD0 228 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 ZNF732B4DXR9 585 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 CLN5O75503 358 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 FARS2O95363 451 aaKnown RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 IL6RP08887 468 aaPredicted RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 QDPRP09417 244 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 ZNF20P17024 532 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 DUSP1P28562 367 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 MPLP40238 635 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 GFERP55789 205 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 BIDP55957 195 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 MFAP5Q13361 173 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 DAZAP2Q15038 168 aaPredicted RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 OR8B8Q15620 311 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 UBE2V2Q15819 145 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 TMEM176BQ3YBM2 270 aaPredicted RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 FAM76BQ5HYJ3 339 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 DPPA3Q6W0C5 159 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 RBMS3Q6XE24 437 aaKnown RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 ANKRD37Q7Z713 158 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 OR2M3Q8NG83 312 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 SECTM1Q8WVN6 248 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 MRPL24Q96A35 216 aaKnown RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 ZNF501Q96CX3 271 aaPredicted RBP3.37□□□□□ -1.87
CLTC-209ENST00000498711 TMEM56Q96MV1 263 aa3.37□□□□□ -1.87
CLTC-209ENST00000498711 WDR77Q9BQA1 342 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms