RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 FAM90A14PP0C7W9 464 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 FAM90A24PP0C7X0 464 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 ZNF44P15621 663 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 SLC2A5P22732 501 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 GLP1RP43220 463 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 GPR12P47775 334 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 NPBWR2P48146 333 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 RAB7AP51149 207 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 CDC42P60953 191 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 CXCR4P61073 352 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 ACTR3P61158 418 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 GABPB1Q06547 395 aaPredicted RBP9.12□□□□□ -0.95
CDK9-205ENST00000498339 MADCAM1Q13477 382 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 ATXN7L3Q14CW9 347 aaPredicted RBP9.12□□□□□ -0.95
CDK9-205ENST00000498339 ZNF146Q15072 292 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 UBE2V2Q15819 145 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 OR2T5Q6IEZ7 315 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 ELMOD2Q8IZ81 293 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 OR10X1Q8NGY0 326 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 OR2T29Q8NH02 315 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 CNN2Q99439 309 aaKnown RBP9.12□□□□□ -0.95
CDK9-205ENST00000498339 FEVQ99581 238 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 APOL4Q9BPW4 351 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 SNX5Q9Y5X3 404 aa9.12□□□□□ -0.95
CDK9-205ENST00000498339 A0A1B0GTI1 187 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 ZNF729A6NN14 1252 aaPredicted RBP9.11□□□□□ -0.95
CDK9-205ENST00000498339 J3QR06 171 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 CCRL2O00421 344 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 SYT7O43581 403 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 RPP14O95059 124 aaKnown RBP9.11□□□□□ -0.95
CDK9-205ENST00000498339 SERPINA3P01011 423 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 OCM2P0CE71 109 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 OCMP0CE72 109 aaPredicted RBP9.11□□□□□ -0.95
CDK9-205ENST00000498339 GP9P14770 177 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 SPNP16150 400 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 ATP6V1B2P21281 511 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 MAGEA2P43356 314 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 ATP1B3P54709 279 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 FHL3Q13643 280 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 DIAPH2-AS1Q14236 149 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 UTF1Q5T230 341 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 ZNF322Q6U7Q0 402 aaPredicted RBP9.11□□□□□ -0.95
CDK9-205ENST00000498339 CD300LDQ6UXZ3 194 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 MOB3BQ86TA1 216 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 ZNF429Q86V71 674 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 PGAM4Q8N0Y7 254 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 OR8H3Q8N146 312 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 GIPC3Q8TF64 312 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 CORO2AQ92828 525 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 KIRREL1Q96J84 757 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 OR5B12Q96R08 314 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 ADI1Q9BV57 179 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 KRT84Q9NSB2 600 aa9.11□□□□□ -0.95
CDK9-205ENST00000498339 PLECQ15149 4684 aaKnown RBP9.11□□□□□ -0.95
CDK9-205ENST00000498339 A0A087X0M5 115 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 IGHV3-72A0A0B4J1Y9 119 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 A0A1B0GX30 115 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 TRIM64CA6NLI5 447 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 HSPB6O14558 160 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 HSD17B6O14756 317 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 SRSF10O75494 262 aaKnown RBP9.1□□□□□ -0.95
CDK9-205ENST00000498339 PRDX6P30041 224 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 RBP2P50120 134 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 TGIF2LXQ8IUE1 241 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 OR1N2Q8NGR9 330 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 RASL11BQ9BPW5 248 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 CHST5Q9GZS9 411 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 ABCG5Q9H222 651 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 MAGIXQ9H6Y5 334 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 ZNF556Q9HAH1 456 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 SEBOXQ9HB31 216 aaPredicted RBP9.1□□□□□ -0.95
CDK9-205ENST00000498339 LIN7CQ9NUP9 197 aaKnown RBP9.1□□□□□ -0.95
CDK9-205ENST00000498339 OR6C3Q9NZP0 311 aa9.1□□□□□ -0.95
CDK9-205ENST00000498339 KBTBD11-OT1A0A1B0GTJ5 212 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 CCDC182A6NF36 153 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 ZNF670-ZNF695F2Z2N8 137 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 OVOL1O14753 267 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 LDLRAD4O15165 306 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 MPZL2O60487 215 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 CCL1P22362 96 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 REG1BP48304 166 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 MTCP1P56278 107 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 ZNF616Q08AN1 781 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 C17orf58Q2M2W7 97 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 FAM98BQ52LJ0 330 aaKnown RBP9.09□□□□□ -0.95
CDK9-205ENST00000498339 TMEM236Q5W0B7 351 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 TMEM65Q6PI78 240 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 SLC35F2Q8IXU6 374 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 YIPF7Q8N8F6 280 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 OR6Q1Q8NGQ2 317 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 HAVCR2Q8TDQ0 301 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 RFT1Q96AA3 541 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 TM2D3Q9BRN9 247 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 PPIL3Q9H2H8 161 aaKnown RBP9.09□□□□□ -0.95
CDK9-205ENST00000498339 EDA2RQ9HAV5 297 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 NEK6Q9HC98 313 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 HMG20AQ9NP66 347 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 CALYQ9NYX4 217 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 TVP23BQ9NYZ1 205 aa9.09□□□□□ -0.95
CDK9-205ENST00000498339 ALMS1Q8TCU4 4167 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms