RNA–Protein interactions for RNA: ENST00000498328.1

USP33-210, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-210ENST00000498328 PSG11Q9UQ72 335 aa2.16□□□□□ -2.06
USP33-210ENST00000498328 KCNK6Q9Y257 313 aa2.16□□□□□ -2.06
USP33-210ENST00000498328 ST3GAL6Q9Y274 331 aa2.16□□□□□ -2.06
USP33-210ENST00000498328 NOP16Q9Y3C1 178 aaKnown RBP2.16□□□□□ -2.06
USP33-210ENST00000498328 MRPS16Q9Y3D3 137 aaKnown RBP2.16□□□□□ -2.06
USP33-210ENST00000498328 ZNF337Q9Y3M9 751 aa2.16□□□□□ -2.06
USP33-210ENST00000498328 YIPF1Q9Y548 306 aa2.16□□□□□ -2.06
USP33-210ENST00000498328 CSAG2Q9Y5P2 127 aa2.16□□□□□ -2.06
USP33-210ENST00000498328 ZFP37Q9Y6Q3 630 aaPredicted RBP2.16□□□□□ -2.06
USP33-210ENST00000498328 MIA3Q5JRA6 1907 aa2.16□□□□□ -2.06
USP33-210ENST00000498328 CRYBG3Q68DQ2 2970 aa2.16□□□□□ -2.06
USP33-210ENST00000498328 BRCA1P38398 1863 aaKnown RBP2.16□□□□□ -2.06
USP33-210ENST00000498328 ALPK3Q96L96 1907 aa2.15□□□□□ -2.06
USP33-210ENST00000498328 SIP14410 1827 aa2.15□□□□□ -2.06
USP33-210ENST00000498328 PATJQ8NI35 1801 aa2.15□□□□□ -2.06
USP33-210ENST00000498328 LOC100509620A0A075B734 347 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 KCNE1BA0A087WTH5 132 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 IGKV6-21A0A0C4DH24 114 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 IGHV2-70DA0A0C4DH43 119 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 SERTM2A0A1B0GWG4 89 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 A0A1W2PPE2 198 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 RBFOX3A6NFN3 312 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 OR51F1A6NGY5 319 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 A6NIN4 97 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 NPIPB13A6NJU9 1138 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 DHRS7CA6NNS2 312 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 YDJCA8MPS7 323 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 NPIPB5A8MRT5 1133 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 FAM166BA8MTA8 275 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 C17orf100A8MU93 164 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 SERPINE3A8MV23 424 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 NPIPB4C9JG80 1138 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 C9JQL5 133 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 NPIPA7E9PJI5 369 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 H3BQ15 152 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 M0R129 80 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 FFAR1O14842 300 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 WNT9BO14905 357 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 CCL25O15444 150 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 TAPBPO15533 448 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 ZNF264O43296 627 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 ZNF354AO60765 605 aaPredicted RBP2.15□□□□□ -2.07
USP33-210ENST00000498328 TBX19O60806 448 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 RAMP3O60896 148 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 SMPD2O60906 423 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 LRP3O75074 770 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 SRSF10O75494 262 aaKnown RBP2.15□□□□□ -2.07
USP33-210ENST00000498328 ERAL1O75616 437 aaKnown RBP2.15□□□□□ -2.07
USP33-210ENST00000498328 SCGNO76038 276 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 RCBTB2O95199 551 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 SOX14O95416 240 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 SLC16A8O95907 504 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 TBX18O95935 607 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 PDYNP01213 254 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 HBE1P02100 147 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 TYMSP04818 313 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 CSN2P05814 226 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 TACSTD2P09758 323 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 ZNF286BP0CG31 522 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 GIMD1P0DJR0 217 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 NPIPA8P0DM63 369 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 OR12D1P0DN82 309 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 PTHLHP12272 177 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 GATA1P15976 413 aaPredicted RBP2.15□□□□□ -2.07
USP33-210ENST00000498328 ZNF7P17097 686 aaPredicted RBP2.15□□□□□ -2.07
USP33-210ENST00000498328 SERPINA2P20848 420 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 GLRA1P23415 457 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 CDK2P24941 298 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 CST5P28325 142 aaPredicted RBP2.15□□□□□ -2.07
USP33-210ENST00000498328 IMPA1P29218 277 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 APLNRP35414 380 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 CEACAM3P40198 252 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 AQP2P41181 271 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 AKR1C3P42330 323 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 LPAR6P43657 344 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 RPL29P47914 159 aaKnown RBP2.15□□□□□ -2.07
USP33-210ENST00000498328 ARRB1P49407 418 aaPredicted RBP2.15□□□□□ -2.07
USP33-210ENST00000498328 RAB28P51157 221 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 BLKP51451 505 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 NOVA1P51513 510 aaKnown RBP2.15□□□□□ -2.07
USP33-210ENST00000498328 EFNA3P52797 238 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 PDX1P52945 283 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 LIM2P55344 173 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 TMEM33P57088 247 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 UBE2NP61088 152 aaKnown RBP2.15□□□□□ -2.07
USP33-210ENST00000498328 GNB1P62873 340 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 SIRPAP78324 504 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 RBPJQ06330 500 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 RASGEF1BQ0VAM2 473 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 ZNF235Q14590 738 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 GPNMBQ14956 572 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 CDK5R1Q15078 307 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 ELOCQ15369 112 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 PRSS8Q16651 343 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 ODF4Q2M2E3 257 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 HYAL4Q2M3T9 481 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 TCTN1Q2MV58 587 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 SMIM21Q3B7S5 101 aa2.15□□□□□ -2.07
USP33-210ENST00000498328 ZNF791Q3KP31 576 aaPredicted RBP2.15□□□□□ -2.07
USP33-210ENST00000498328 MPPE1Q53F39 396 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms