RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 MBP02144 154 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 EIF4EP06730 217 aaKnown RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 FBP1P09467 338 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 LINC00614P0C842 121 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 SLC2A1P11166 492 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 RALBP11234 206 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 PSKH1P11801 424 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 CYBAP13498 195 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 HLA-EP13747 358 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 SPI1P17947 270 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 GALP22466 123 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 CRABP1P29762 137 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 CEACAM6P40199 344 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ETV6P41212 452 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 CDKN2BP42772 138 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 NSG1P42857 185 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 MAGEA1P43355 309 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 SLCO1A2P46721 670 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 NDUFA8P51970 172 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 RND2P52198 227 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 UGT2B15P54855 530 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ATP5IP56385 69 aaPredicted RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 EIF3EP60228 445 aaKnown RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 GABARAPL2P60520 117 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 RAP1AP62834 184 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 REEP5Q00765 189 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 IFITM2Q01629 132 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 SRSF5Q13243 272 aaKnown RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 BIKQ13323 160 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ART3Q13508 389 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 RCAN2Q14206 197 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 CLINT1Q14677 625 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 GINS1Q14691 196 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 RGNQ15493 299 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 TOMM34Q15785 309 aaPredicted RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 CHRNA6Q15825 494 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 FAM83EQ2M2I3 478 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 CLLU1Q5K131 121 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 RBM48Q5RL73 367 aaKnown RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 ARMC12Q5T9G4 340 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 HACD4Q5VWC8 232 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 NANOGP8Q6NSW7 305 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 RPL13AP3Q6NVV1 102 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 SPNS3Q6ZMD2 512 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 Q6ZSR3 168 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 SLC25A48Q6ZT89 311 aaKnown RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 TMEM179Q6ZVK1 233 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 EIF3MQ7L2H7 374 aaKnown RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 SLC13A5Q86YT5 568 aaPredicted RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 C10orf107Q8IVU9 208 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ZNF695Q8IW36 515 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 TCTE3Q8IZS6 198 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 STPG2Q8N412 459 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ATPAF2Q8N5M1 289 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 EIF4E3Q8N5X7 224 aaKnown RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 TRAM1L1Q8N609 369 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ZNF615Q8N8J6 731 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 OR10G2Q8NGC3 310 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ZFAND1Q8TCF1 268 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 TCP10LQ8TDR4 215 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 C10orf82Q8WW14 230 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 TMEM203Q969S6 136 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 NTAN1Q96AB6 310 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 EEF1AKMT3Q96AZ1 226 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 C12orf43Q96C57 262 aaKnown RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 RASD2Q96D21 266 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 OTUB2Q96DC9 234 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 WFIKKN1Q96NZ8 548 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 PPP1R2P1Q96PQ5 205 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 KCTD14Q9BQ13 255 aaPredicted RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 ANKRD60Q9BZ19 345 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 PLA2G12AQ9BZM1 189 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 METTL9Q9H1A3 318 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 NEUROG2Q9H2A3 272 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 GAL3ST2Q9H3Q3 398 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 SAV1Q9H4B6 383 aaPredicted RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 CXorf21Q9HAI6 301 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 SPACA1Q9HBV2 294 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ZNF160Q9HCG1 818 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 MYOZ1Q9NP98 299 aaPredicted RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 FBXO8Q9NRD0 319 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 FAM49BQ9NUQ9 324 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 MED11Q9P086 117 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ZNF629Q9UEG4 869 aaPredicted RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 CRCT1Q9UGL9 99 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ENOPH1Q9UHY7 261 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 CD84Q9UIB8 345 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 RWDD2AQ9UIY3 292 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ZNF835Q9Y2P0 537 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 SNX24Q9Y343 169 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 RBMX2Q9Y388 322 aaKnown RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 GOLT1BQ9Y3E0 138 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 MYH6P13533 1939 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 PCNX2A6NKB5 2137 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 HERC2O95714 4834 aa1.6□□□□□ -2.15
CBX3-208ENST00000497498 ZANQ9Y493 2812 aa1.6□□□□□ -2.15
CBX3-208ENST00000497498 RYR2Q92736 4967 aa1.6□□□□□ -2.15
CBX3-208ENST00000497498 MED13Q9UHV7 2174 aa1.6□□□□□ -2.15
CBX3-208ENST00000497498 A0A0A6YYH2 397 aa1.6□□□□□ -2.15
CBX3-208ENST00000497498 A0A0B4J2A0 478 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms