RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 RRP9O43818 475 aaKnown RBP9.4□□□□□ -0.9
HLA-B-254ENST00000497377 PSPNO60542 156 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 VENTXO95231 258 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 CALCBP10092 127 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 OR3A1P47881 315 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 SNU13P55769 128 aaKnown RBP9.4□□□□□ -0.9
HLA-B-254ENST00000497377 Q6P435 159 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 BRD3OSQ6XYD6 125 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 CEACAM19Q7Z692 300 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 PHC2Q8IXK0 858 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 BCL6BQ8N143 479 aaPredicted RBP9.4□□□□□ -0.9
HLA-B-254ENST00000497377 OSR2Q8N2R0 312 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 JAGN1Q8N5M9 183 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 SIGLECL1Q8N7X8 197 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 OR4M1Q8NGD0 313 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 FCGR1BQ92637 280 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 FOXRED1Q96CU9 486 aaPredicted RBP9.4□□□□□ -0.9
HLA-B-254ENST00000497377 MRPS24Q96EL2 167 aaKnown RBP9.4□□□□□ -0.9
HLA-B-254ENST00000497377 SLITRK2Q9H156 845 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 IFT22Q9H7X7 185 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 HEXA-AS1Q9H8Q6 139 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 ACOT13Q9NPJ3 140 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 SIRT7Q9NRC8 400 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 GHRLQ9UBU3 117 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 ING4Q9UNL4 249 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 LRRC42Q9Y546 428 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 LINC00312Q9Y6C7 94 aa9.4□□□□□ -0.9
HLA-B-254ENST00000497377 A0A0G2JK05 382 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 MAGEA13PA6NCF6 341 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 C17orf98A8MV24 154 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 RNASEK-C17orf49H0YIS7 233 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 SIRPB1O00241 398 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 SLC33A1O00400 549 aaPredicted RBP9.39□□□□□ -0.91
HLA-B-254ENST00000497377 ARL6IP5O75915 188 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 CDRT1O95170 752 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 HTR3BO95264 441 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 MAS1P04201 325 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 UCHL1P09936 223 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 ZNF728P0DKX0 622 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 GTF2F2P13984 249 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 SRMP19623 302 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 GABRA5P31644 462 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 RANBP1P43487 201 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 MAP2K4P45985 399 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 KCNJ3P48549 501 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 UBE2E1P51965 193 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 P2RX3P56373 397 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 RBM11P57052 281 aaKnown RBP9.39□□□□□ -0.91
HLA-B-254ENST00000497377 ERVFRD-1P60508 538 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 EMX1Q04741 257 aaPredicted RBP9.39□□□□□ -0.91
HLA-B-254ENST00000497377 SCN1BQ07699 218 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 EDDM3AQ14507 147 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 MPV17LQ2QL34 196 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 KRTAP24-1Q3LI83 254 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 HSD17B12Q53GQ0 312 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 OR4S1Q8NGB4 309 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 FAM216AQ8WUB2 273 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 TNFRSF14Q92956 283 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 MDFIQ99750 246 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 CHST6Q9GZX3 395 aa9.39□□□□□ -0.91
HLA-B-254ENST00000497377 MRPS28Q9Y2Q9 187 aaKnown RBP9.39□□□□□ -0.91
HLA-B-254ENST00000497377 SF3B6Q9Y3B4 125 aaKnown RBP9.39□□□□□ -0.91
HLA-B-254ENST00000497377 H3BUI4 141 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 CLDN34H7C241 214 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 RGS9O75916 674 aaPredicted RBP9.38□□□□□ -0.91
HLA-B-254ENST00000497377 UBBP0CG47 229 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 DLX6P56179 175 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 PAX5Q02548 391 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 BAMBIQ13145 260 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 ZNF273Q14593 569 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 INSL4Q14641 139 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 DEFB112Q30KQ8 113 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 SLC22A6Q4U2R8 563 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 MIDNQ504T8 468 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 RUSC1-AS1Q66K80 236 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 GLT8D1Q68CQ7 371 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 AWAT2Q6E213 333 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 LYPD6Q86Y78 171 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 C11orf42Q8N5U0 333 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 ZDHHC22Q8N966 263 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 OR10K1Q8NGX5 313 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 CORO2AQ92828 525 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 TMEM203Q969S6 136 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 MUL1Q969V5 352 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 ZNF48Q96MX3 618 aaPredicted RBP9.38□□□□□ -0.91
HLA-B-254ENST00000497377 ZNF714Q96N38 554 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 NR1H4Q96RI1 486 aaPredicted RBP9.38□□□□□ -0.91
HLA-B-254ENST00000497377 PPA2Q9H2U2 334 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 NCOR1P1Q9H4R4 102 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 ST3GAL6Q9Y274 331 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 UBE2J1Q9Y385 318 aaPredicted RBP9.38□□□□□ -0.91
HLA-B-254ENST00000497377 FAM96BQ9Y3D0 163 aa9.38□□□□□ -0.91
HLA-B-254ENST00000497377 TRGV10A0A0A0MS01 117 aa9.37□□□□□ -0.91
HLA-B-254ENST00000497377 DNAJC9-AS1A6NH13 148 aa9.37□□□□□ -0.91
HLA-B-254ENST00000497377 NPFFO15130 113 aa9.37□□□□□ -0.91
HLA-B-254ENST00000497377 FBP1P09467 338 aa9.37□□□□□ -0.91
HLA-B-254ENST00000497377 CD37P11049 281 aa9.37□□□□□ -0.91
HLA-B-254ENST00000497377 CCL3L1P16619 93 aa9.37□□□□□ -0.91
HLA-B-254ENST00000497377 SERPINA2P20848 420 aa9.37□□□□□ -0.91
HLA-B-254ENST00000497377 GALP22466 123 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms