RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 CSN2P05814 226 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 ZNF44P15621 663 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 EEF1B2P24534 225 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 GLIPR1P48060 266 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 BMXP51813 675 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 SCN1BQ07699 218 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 TAF9Q16594 264 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 NHLRC3Q5JS37 347 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 FAM27D1Q5T7N8 215 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 PRSS48Q7RTY5 328 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 CHST4Q8NCG5 386 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 SSMEM1Q8WWF3 244 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 GCDHQ92947 438 aaPredicted RBP13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 FAM192AQ9GZU8 254 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 PPIL3Q9H2H8 161 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 TNFRSF19Q9NS68 423 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 SF3B6Q9Y3B4 125 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 POMT1Q9Y6A1 747 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 A0A1W2PP11 408 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 hADV38S2A0JD32 116 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 ODF3BA8MYP8 253 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 DEGS1O15121 323 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 MMP23AO75900 390 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 HTR3BO95264 441 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 MAS1P04201 325 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 IGHV1-8P0DP01 117 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 MAP2K4P45985 399 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 AESQ08117 197 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 IL13RA2Q14627 380 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 RSU1Q15404 277 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 MED22Q15528 200 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 MIDNQ504T8 468 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 ACSM3Q53FZ2 586 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 AWAT1Q58HT5 328 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 LDLRAD2Q5SZI1 272 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 CORO2AQ92828 525 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 ZNF714Q96N38 554 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 NR1H4Q96RI1 486 aaPredicted RBP13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 METTL9Q9H1A3 318 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 HEXA-AS1Q9H8Q6 139 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 CKLFQ9UBR5 152 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 ING4Q9UNL4 249 aa13.11□□□□□ -0.31
DNMT3A-215ENST00000496570 FAM181BA6NEQ2 426 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 FAM90A8PA6NJQ4 464 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 FBP1P09467 338 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 COX7A1P24310 79 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 PAX6P26367 422 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 RELBQ01201 579 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 GPR50Q13585 617 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 TPBGQ13641 420 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 ATXN7L3Q14CW9 347 aaPredicted RBP13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 RBM48Q5RL73 367 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 LIPKQ5VXJ0 399 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 BAIAP2L2Q6UXY1 529 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 LRRTM1Q86UE6 522 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 CDH26Q8IXH8 852 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 DYNAPQ8N1N2 210 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 BEND2Q8NDZ0 799 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 OR4D6Q8NGJ1 314 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 PPP1R35Q8TAP8 253 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 MUL1Q969V5 352 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 TMED9Q9BVK6 235 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 IFT22Q9H7X7 185 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 ISYNA1Q9NPH2 558 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 UBE2J1Q9Y385 318 aaPredicted RBP13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 FAM96BQ9Y3D0 163 aa13.1□□□□□ -0.31
DNMT3A-215ENST00000496570 hCG_1809904A0A1W2PP81 198 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 A0A1W2PPE2 198 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 A0A1W2PR64 198 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 A0A1W2PRV1 198 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 ODAMA1E959 279 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 MEGF11A6BM72 1044 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 CGB3P0DN86 165 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 CGB7P0DN87 165 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 MAPK3P27361 379 aaPredicted RBP13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 CFPP27918 469 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 GDNFP39905 211 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 RBM11P57052 281 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 PAX5Q02548 391 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 C12orf54Q6X4T0 127 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 TMEM91Q6ZNR0 172 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 LHFPL4Q7Z7J7 247 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 OSR2Q8N2R0 312 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 MS4A15Q8N5U1 240 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 OR11H6Q8NGC7 330 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 PLPPR1Q8TBJ4 325 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 C1RLQ9NZP8 487 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 ST3GAL6Q9Y274 331 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 FBN3Q75N90 2809 aa13.09□□□□□ -0.31
DNMT3A-215ENST00000496570 HSPB6O14558 160 aa13.08□□□□□ -0.32
DNMT3A-215ENST00000496570 GEMIN2O14893 280 aaKnown RBP13.08□□□□□ -0.32
DNMT3A-215ENST00000496570 DENRO43583 198 aaKnown RBP13.08□□□□□ -0.32
DNMT3A-215ENST00000496570 CLPXO76031 633 aa13.08□□□□□ -0.32
DNMT3A-215ENST00000496570 UCHL1P09936 223 aa13.08□□□□□ -0.32
DNMT3A-215ENST00000496570 CD37P11049 281 aa13.08□□□□□ -0.32
DNMT3A-215ENST00000496570 SERPINA2P20848 420 aa13.08□□□□□ -0.32
DNMT3A-215ENST00000496570 RPS25P62851 125 aaKnown RBP13.08□□□□□ -0.32
DNMT3A-215ENST00000496570 MLLT11Q13015 90 aaPredicted RBP13.08□□□□□ -0.32
DNMT3A-215ENST00000496570 C17orf58Q2M2W7 97 aa13.08□□□□□ -0.32
DNMT3A-215ENST00000496570 SLC22A6Q4U2R8 563 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms