RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 VPS13CQ709C8 3753 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 IGHV4-30-2A0A087WSY4 118 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 TMEM82A0PJX8 343 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 CEACAM18A8MTB9 384 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 SIGLEC5O15389 551 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 ADAM20O43506 726 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 NR4A2P43354 598 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 C17orf107Q6ZR85 190 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 IZUMO1Q8IYV9 350 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 FAM216BQ8N7L0 139 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 MED30Q96HR3 178 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 SHARPINQ9H0F6 387 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 NARFLQ9H6Q4 476 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 KCNK7Q9Y2U2 307 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 MED13LQ71F56 2210 aa18.16■□□□□ 0.5
ECHDC3-205ENST00000496136 TRAV18A0A075B6X5 111 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 HSPB6O14558 160 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 SELLP14151 372 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 TALDO1P37837 337 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 IL13RA1P78552 427 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 MADCAM1Q13477 382 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 TMEM69Q5SWH9 247 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 PRSS57Q6UWY2 283 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 LINC00299Q6ZSB3 139 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 SLC36A1Q7Z2H8 476 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 CCDC190Q86UF4 302 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 SPICQ8N5J4 248 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 ASCC1Q8N9N2 400 aaKnown RBP18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 FAAP24Q9BTP7 215 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 DPCDQ9BVM2 203 aaPredicted RBP18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 PECRQ9BY49 303 aa18.15■□□□□ 0.5
ECHDC3-205ENST00000496136 K7N7A8 449 aa18.14■□□□□ 0.5
ECHDC3-205ENST00000496136 GNB3P16520 340 aa18.14■□□□□ 0.5
ECHDC3-205ENST00000496136 CDNFQ49AH0 187 aa18.14■□□□□ 0.5
ECHDC3-205ENST00000496136 PAN3Q58A45 887 aaKnown RBP18.14■□□□□ 0.5
ECHDC3-205ENST00000496136 Q5PR19 223 aa18.14■□□□□ 0.5
ECHDC3-205ENST00000496136 OR4S1Q8NGB4 309 aa18.14■□□□□ 0.5
ECHDC3-205ENST00000496136 SNX22Q96L94 193 aa18.14■□□□□ 0.5
ECHDC3-205ENST00000496136 SULT4A1Q9BR01 284 aa18.14■□□□□ 0.5
ECHDC3-205ENST00000496136 CHST6Q9GZX3 395 aa18.14■□□□□ 0.5
ECHDC3-205ENST00000496136 CTSZQ9UBR2 303 aa18.14■□□□□ 0.5
ECHDC3-205ENST00000496136 MIOXQ9UGB7 285 aa18.14■□□□□ 0.5
ECHDC3-205ENST00000496136 MRPS7Q9Y2R9 242 aaKnown RBP18.14■□□□□ 0.5
ECHDC3-205ENST00000496136 NKX6-3A6NJ46 265 aa18.14■□□□□ 0.49
ECHDC3-205ENST00000496136 MCRIP1C9JLW8 97 aa18.14■□□□□ 0.49
ECHDC3-205ENST00000496136 WNT2P09544 360 aa18.14■□□□□ 0.49
ECHDC3-205ENST00000496136 HIST1H1DP16402 221 aaKnown RBP18.14■□□□□ 0.49
ECHDC3-205ENST00000496136 ZNF260Q3ZCT1 412 aa18.14■□□□□ 0.49
ECHDC3-205ENST00000496136 OLFML2AQ68BL7 652 aa18.14■□□□□ 0.49
ECHDC3-205ENST00000496136 PPA2Q9H2U2 334 aa18.14■□□□□ 0.49
ECHDC3-205ENST00000496136 PCDHB10Q9UN67 800 aa18.14■□□□□ 0.49
ECHDC3-205ENST00000496136 MALRD1Q5VYJ5 2156 aa18.14■□□□□ 0.49
ECHDC3-205ENST00000496136 UBE2QL1A1L167 161 aa18.13■□□□□ 0.49
ECHDC3-205ENST00000496136 FCN3O75636 299 aa18.13■□□□□ 0.49
ECHDC3-205ENST00000496136 HLA-DQB1P01920 261 aa18.13■□□□□ 0.49
ECHDC3-205ENST00000496136 TK1P04183 234 aa18.13■□□□□ 0.49
ECHDC3-205ENST00000496136 GLAP06280 429 aa18.13■□□□□ 0.49
ECHDC3-205ENST00000496136 OR3A1P47881 315 aa18.13■□□□□ 0.49
ECHDC3-205ENST00000496136 KRTAP1-3Q8IUG1 177 aa18.13■□□□□ 0.49
ECHDC3-205ENST00000496136 SOSTQ9BQB4 213 aa18.13■□□□□ 0.49
ECHDC3-205ENST00000496136 PATZ1Q9HBE1 687 aaKnown RBP18.13■□□□□ 0.49
ECHDC3-205ENST00000496136 ELF5Q9UKW6 265 aaPredicted RBP18.13■□□□□ 0.49
ECHDC3-205ENST00000496136 FABP12A6NFH5 140 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 MFNGO00587 321 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 TAS2R20P59543 309 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 RBM39Q14498 530 aaKnown RBP18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 TMEM185AQ8NFB2 350 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 ST8SIA4Q92187 359 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 FOXC2Q99958 501 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 FAM234AQ9H0X4 552 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 PTHLHP12272 177 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 RPS2P15880 293 aaKnown RBP18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 ETV6P41212 452 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 ARL6IP1Q15041 203 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 ZNF841Q6ZN19 808 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 OR8H2Q8N162 312 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 FGFRL1Q8N441 504 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 OR5D13Q8NGL4 314 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 CLDND2Q8NHS1 167 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 PPP1R35Q8TAP8 253 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 NEK7Q8TDX7 302 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 ABHD1Q96SE0 405 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 AUNIPQ9H7T9 357 aa18.12■□□□□ 0.49
ECHDC3-205ENST00000496136 KIAA2026Q5HYC2 2103 aa18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 A0A0G2JMP0 313 aa18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 A0A0X1KG70 313 aa18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 DVL1O14640 695 aa18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 NDUFB3O43676 98 aa18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 LMO4P61968 165 aa18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 GRK1Q15835 563 aa18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 SPANXN2Q5MJ10 180 aa18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 SHEQ5VZ18 495 aa18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 OR4M2Q8NGB6 313 aa18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 NEIL1Q96FI4 390 aaPredicted RBP18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 SLC25A10Q9UBX3 287 aaPredicted RBP18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 V9GYH0 126 aa18.11■□□□□ 0.49
ECHDC3-205ENST00000496136 IGHV4-61A0A0C4DH41 118 aa18.1■□□□□ 0.49
ECHDC3-205ENST00000496136 TMEM235A6NFC5 223 aa18.1■□□□□ 0.49
ECHDC3-205ENST00000496136 SERPINE3A8MV23 424 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms