RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 DCTN6O00399 190 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 RER1O15258 196 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 ENSAO43768 121 aaKnown RBP3.41□□□□□ -1.86
VPS52-222ENST00000495981 CDK2AP2O75956 126 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 IGHV4-59P01825 116 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 DUX4L2P0CJ85 424 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 DUX4L3P0CJ86 424 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 DUX4L4P0CJ87 422 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 DUX4L5P0CJ88 424 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 DUX4L6P0CJ89 424 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 DUX4L7P0CJ90 424 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 IFI30P13284 250 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 TUBG1P23258 451 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 CD200P41217 278 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 OR1E2P47887 323 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 MNAT1P51948 309 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 ARHGDIAP52565 204 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 RAP1BP61224 184 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 PCBD1P61457 104 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 RAP1AP62834 184 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 GNB2P62879 340 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 HIST1H3AP68431 136 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 MAB21L1Q13394 359 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 SGCAQ16586 387 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 TAF9Q16594 264 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 LRRC23Q53EV4 343 aaPredicted RBP3.41□□□□□ -1.86
VPS52-222ENST00000495981 CYBRD1Q53TN4 286 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 TTMPQ5BVD1 217 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 CASC10Q5T4H9 136 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 HIST2H3PS2Q5TEC6 136 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 DUX4L9Q6RFH8 374 aaPredicted RBP3.41□□□□□ -1.86
VPS52-222ENST00000495981 FIP1L1Q6UN15 594 aaKnown RBP3.41□□□□□ -1.86
VPS52-222ENST00000495981 LYPD2Q6UXB3 125 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 BTNL3Q6UXE8 466 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 LRRN1Q6UXK5 716 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 UNQ6126/PRO20091Q6UXV3 157 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 HIST2H3AQ71DI3 136 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 VTCN1Q7Z7D3 282 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 LHFPL4Q7Z7J7 247 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 CROCCP2Q86T23 111 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 OR5AS1Q8N127 324 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 FGFRL1Q8N441 504 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 BHLHE23Q8NDY6 225 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 C19orf18Q8NEA5 215 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 SLC26A10Q8NG04 563 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 OR8J3Q8NGG0 315 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 OR8B3Q8NGG8 313 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 OR13C5Q8NGS8 318 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 LINC01006Q8NI28 216 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 FNDC8Q8TC99 324 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 HAVCR1Q96D42 359 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 CMBLQ96DG6 245 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 Q96M85 177 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 OR8B2Q96RD0 313 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 RAB40CQ96S21 281 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 WACQ9BTA9 647 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 HDHD2Q9H0R4 259 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 SYT4Q9H2B2 425 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 WDR76Q9H967 626 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 ELOVL3Q9HB03 270 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 TMEM165Q9HC07 324 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 TUBG2Q9NRH3 451 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 ZNF446Q9NWS9 450 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 NKIRAS1Q9NYS0 192 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 PTTG3PQ9NZH4 202 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.41□□□□□ -1.86
VPS52-222ENST00000495981 ZNF319Q9P2F9 582 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 EIF3KQ9UBQ5 218 aaKnown RBP3.41□□□□□ -1.86
VPS52-222ENST00000495981 DUX4Q9UBX2 424 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 MIOXQ9UGB7 285 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 RIMS3Q9UJD0 308 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 STARD10Q9Y365 291 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 MED31Q9Y3C7 131 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 TIMM10BQ9Y5J6 103 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 HSPG2P98160 4391 aa3.4□□□□□ -1.86
VPS52-222ENST00000495981 A0A087WUU8 490 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 A0A087WZ39 114 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 IGHV1-69DA0A0B4J2H0 117 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 CENPVL3A0A0U1RRI6 287 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 WI2-2373I1.2A0A1W2PRP0 233 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 A0A1W2PS18 150 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 EFCAB9A8MZ26 197 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 LGALS8O00214 317 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 ARPC1BO15143 372 aaKnown RBP3.4□□□□□ -1.87
VPS52-222ENST00000495981 MAGEB3O15480 346 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 IGHV1-69P01742 117 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 CD14P08571 375 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 ACSM4P0C7M7 580 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 OTX1P32242 354 aaPredicted RBP3.4□□□□□ -1.87
VPS52-222ENST00000495981 PTGFRP43088 359 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 RGS6P49758 472 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 LSM6P62312 80 aaKnown RBP3.4□□□□□ -1.87
VPS52-222ENST00000495981 PRKCDQ05655 676 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 MPPED2Q15777 294 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 RSPO1Q2MKA7 263 aaPredicted RBP3.4□□□□□ -1.87
VPS52-222ENST00000495981 COQ5Q5HYK3 327 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 BEND6Q5SZJ8 279 aaPredicted RBP3.4□□□□□ -1.87
VPS52-222ENST00000495981 GPR157Q5UAW9 335 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 PRAMEF6Q5VXH4 476 aa3.4□□□□□ -1.87
VPS52-222ENST00000495981 OR2T2Q6IF00 324 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms