RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	FGF16	O43320	207 aa		13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	SULT1C4	O75897	302 aa		13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	CSN2	P05814	226 aa		13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	SNRNP70	P08621	437 aa	Known RBP	13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	POU3F4	P49335	361 aa		13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	SNU13	P55769	128 aa	Known RBP	13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	PDZK1IP1	Q13113	114 aa		13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	RBM39	Q14498	530 aa	Known RBP	13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	SSX6	Q7RTT6	188 aa		13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	TCEANC	Q8N8B7	351 aa		13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	C5orf56	Q8N8D9	126 aa		13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	OR9G1	Q8NH87	305 aa		13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	CCDC124	Q96CT7	223 aa	Known RBP	13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	RHOF	Q9HBH0	211 aa		13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	KIAA2026	Q5HYC2	2103 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	IGKV1-9	A0A0C4DH69	117 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAM107A	O95990	144 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	IGHG2	P01859	326 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	OR2T7	P0C7T2	308 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	ATF1	P18846	271 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAHD1	Q6P587	224 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	LHFPL2	Q6ZUX7	228 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	UTS2B	Q765I0	119 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	CHST4	Q8NCG5	386 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	TMEM163	Q8TC26	289 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	TOMM40L	Q969M1	308 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	RAX2	Q96IS3	184 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	COMMD4	Q9H0A8	199 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	OR6C3	Q9NZP0	311 aa		13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.84	□□□□□ -0.19
TMEM53-209	ENST00000495630	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630		A0A1W2PQL4	384 aa	Predicted RBP	13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	CALB2	P22676	271 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	NFYB	P25208	207 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	DAP	P51397	102 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	HES1	Q14469	280 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	C17orf58	Q2M2W7	97 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	KRBOX4	Q5JUW0	171 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	C9orf66	Q5T8R8	295 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	TEX38	Q6PEX7	206 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	GID4	Q8IVV7	300 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	FOXRED2	Q8IWF2	684 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	ZNF565	Q8N9K5	539 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	OR56B4	Q8NH76	319 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	ADAT3	Q96EY9	351 aa	Predicted RBP	13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	HRASLS5	Q96KN8	279 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	TBX5	Q99593	518 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	WARS2	Q9UGM6	360 aa	Known RBP	13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630	LINC00527	Q9UJ94	153 aa		13.83	□□□□□ -0.2
TMEM53-209	ENST00000495630		J3QR06	171 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	UBC	P0CG48	685 aa	Known RBP	13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	CGB3	P0DN86	165 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	CGB7	P0DN87	165 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	ZNF44	P15621	663 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	TMEM11	P17152	192 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	RAB7A	P51149	207 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	SCN1B	Q07699	218 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	KIR2DS1	Q14954	304 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	UTF1	Q5T230	341 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630		Q6P435	159 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	SLC35E3	Q7Z769	313 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	RDH10	Q8IZV5	341 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	PRSS35	Q8N3Z0	413 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	STPG2	Q8N412	459 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	DRAM1	Q8N682	238 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	OR5M8	Q8NGP6	311 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	SPSB1	Q96BD6	273 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	COQ2	Q96H96	371 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	KIRREL1	Q96J84	757 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	DUX3	Q96PT4	197 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	DCLRE1B	Q9H816	532 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	KRT84	Q9NSB2	600 aa		13.82	□□□□□ -0.2
TMEM53-209	ENST00000495630	IGKV1-12	A0A0C4DH73	117 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	LOC107986453	A0A1B0GWG9	222 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	KDM4B	O94953	1096 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	IGKV1D-12	P01611	117 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	RAB25	P57735	213 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	MADCAM1	Q13477	382 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	HNF4G	Q14541	408 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	PNLIPRP3	Q17RR3	467 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	TMEM244	Q5VVB8	128 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	C12orf73	Q69YU5	71 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	SAXO1	Q8IYX7	474 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	OR8H3	Q8N146	312 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	HAVCR2	Q8TDQ0	301 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	FGGY	Q96C11	551 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	IL4I1	Q96RQ9	567 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	PRR25	Q96S07	402 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	GON7	Q9BXV9	100 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	NCOR1P1	Q9H4R4	102 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630	LINC00574	Q9H8X3	128 aa		13.81	□□□□□ -0.2
TMEM53-209	ENST00000495630		A0A1W2PPI3	338 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	ZAR1L	A6NP61	321 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630		M0R129	80 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	SLC33A1	O00400	549 aa	Predicted RBP	13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	DEGS1	O15121	323 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	FKBP6	O75344	327 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	T-ENOL	P0DO92	83 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	CHAT	P28329	748 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	ECI1	P42126	302 aa		13.8	□□□□□ -0.2

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