RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 DMBX1Q8NFW5 382 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 OR1J1Q8NGS3 322 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 ST7LQ8TDW4 575 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 SLAMF6Q96DU3 332 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 GFI1Q99684 422 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 C1orf198Q9H425 327 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 ISG20L2Q9H9L3 353 aaKnown RBP5.29□□□□□ -1.56
VIM-207ENST00000495528 ELOVL3Q9HB03 270 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 DCAF16Q9NXF7 216 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 PLEK2Q9NYT0 353 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 PURGQ9UJV8 347 aaKnown RBP5.29□□□□□ -1.56
VIM-207ENST00000495528 IKZF2Q9UKS7 526 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 NUP50Q9UKX7 468 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 ERGIC3Q9Y282 383 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 EXOSC1Q9Y3B2 195 aaKnown RBP5.29□□□□□ -1.56
VIM-207ENST00000495528 AUP1Q9Y679 476 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 TMEM14AQ9Y6G1 99 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 CMYA5Q8N3K9 4069 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 PKD1L1Q8TDX9 2849 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 IQCMA0A1B0GVH7 501 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 METTL15A6NJ78 407 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 ZSCAN5BA6NJL1 495 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 F5H5K5 113 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 CTDSP2O14595 271 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 SGCEO43556 437 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 FOXH1O75593 365 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 PTHP01270 115 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 KRT8P05787 483 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 MMP9P14780 707 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 MDKP21741 143 aaPredicted RBP5.28□□□□□ -1.56
VIM-207ENST00000495528 OMGP23515 440 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 APLNRP35414 380 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 WNT5AP41221 380 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 PRKXP51817 358 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 GABARAPL2P60520 117 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 ACTC1P68032 377 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 ACTA1P68133 377 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 SCRN3Q0VDG4 424 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 AQP6Q13520 282 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 SLC9A3R2Q15599 337 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 RSPO1Q2MKA7 263 aaPredicted RBP5.28□□□□□ -1.56
VIM-207ENST00000495528 KCTD21Q4G0X4 260 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 ARMCX4Q5H9R4 360 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 ZNF773Q6PK81 442 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 TMPRSS11AQ6ZMR5 421 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 DPPA2Q7Z7J5 298 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 ZNF679Q8IYX0 411 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 ZNF101Q8IZC7 436 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 OR10S1Q8NGN2 331 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 OR1F12Q8NHA8 337 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 SLC25A40Q8TBP6 338 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 SPRYD4Q8WW59 207 aaPredicted RBP5.28□□□□□ -1.56
VIM-207ENST00000495528 ASB17Q8WXJ9 295 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 SLC7A6Q92536 515 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 MRPL48Q96GC5 212 aaKnown RBP5.28□□□□□ -1.56
VIM-207ENST00000495528 POM121L2Q96KW2 1035 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 C4orf36Q96KX1 117 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 OR5M11Q96RB7 305 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 ZNF649Q9BS31 505 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 CDCA4Q9BXL8 241 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 MROQ9BYG7 248 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 OR2H1Q9GZK4 316 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 SLITRK2Q9H156 845 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 WNT5BQ9H1J7 359 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 BABAM2Q9NXR7 383 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 MRM2Q9UI43 246 aaKnown RBP5.28□□□□□ -1.56
VIM-207ENST00000495528 GNG8Q9UK08 70 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 CAB39Q9Y376 341 aaPredicted RBP5.28□□□□□ -1.56
VIM-207ENST00000495528 INSIG2Q9Y5U4 225 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 NPTNQ9Y639 398 aa5.28□□□□□ -1.56
VIM-207ENST00000495528 TGP01266 2768 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 LOC100509620A0A075B734 347 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 IGHV3OR16-10A0A075B7F0 116 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 A0A1W2PS18 150 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 PRR32B1ATL7 298 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 E9PI62 339 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 CLDN34H7C241 214 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 PHYHO14832 338 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 MYL12BO14950 172 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 MRPS14O60783 128 aaKnown RBP5.27□□□□□ -1.57
VIM-207ENST00000495528 ZNF254O75437 659 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 SULT1C4O75897 302 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 TSPAN9O75954 239 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 NGFP01138 241 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 IGLV2-11P01706 119 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 IGHV2-70P01814 119 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 HSMCR30P0CW71 290 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 IGHV4-38-2P0DP08 117 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 STOMP27105 288 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 HSD11B1P28845 292 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 CD80P33681 288 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 GTF2A1P52655 376 aaPredicted RBP5.27□□□□□ -1.57
VIM-207ENST00000495528 RIDAP52758 137 aaKnown RBP5.27□□□□□ -1.57
VIM-207ENST00000495528 GBX2P52951 348 aaPredicted RBP5.27□□□□□ -1.57
VIM-207ENST00000495528 PRKDCP78527 4128 aaKnown RBP5.27□□□□□ -1.57
VIM-207ENST00000495528 PAX8Q06710 450 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 SLC3A1Q07837 685 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 ECH1Q13011 328 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 SPHARQ15513 63 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 NEDD8Q15843 81 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms