RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 RAP2BP61225 183 aa17.01■□□□□ 0.31
LINC01558-202ENST00000495520 IKZF1Q13422 519 aa17.01■□□□□ 0.31
LINC01558-202ENST00000495520 PPP1R1AQ13522 171 aa17.01■□□□□ 0.31
LINC01558-202ENST00000495520 OR11H4Q8NGC9 324 aa17.01■□□□□ 0.31
LINC01558-202ENST00000495520 MITD1Q8WV92 249 aa17.01■□□□□ 0.31
LINC01558-202ENST00000495520 DHRS9Q9BPW9 319 aa17.01■□□□□ 0.31
LINC01558-202ENST00000495520 NECAP2Q9NVZ3 263 aa17.01■□□□□ 0.31
LINC01558-202ENST00000495520 TRAV24A0A0B4J272 114 aa17■□□□□ 0.31
LINC01558-202ENST00000495520 MCRIP1C9JLW8 97 aa17■□□□□ 0.31
LINC01558-202ENST00000495520 CDIPTO14735 213 aa17■□□□□ 0.31
LINC01558-202ENST00000495520 C1QL1O75973 258 aa17■□□□□ 0.31
LINC01558-202ENST00000495520 PTBP3O95758 552 aaKnown RBP17■□□□□ 0.31
LINC01558-202ENST00000495520 OR5H8P0DN80 308 aa17■□□□□ 0.31
LINC01558-202ENST00000495520 ZNF146Q15072 292 aa17■□□□□ 0.31
LINC01558-202ENST00000495520 SUMF2Q8NBJ7 301 aa17■□□□□ 0.31
LINC01558-202ENST00000495520 POC1AQ8NBT0 407 aa17■□□□□ 0.31
LINC01558-202ENST00000495520 TMEM230Q96A57 120 aa17■□□□□ 0.31
LINC01558-202ENST00000495520 RIMS4Q9H426 269 aaPredicted RBP17■□□□□ 0.31
LINC01558-202ENST00000495520 Q9N2K0 584 aa17■□□□□ 0.31
LINC01558-202ENST00000495520 ZFYVE26Q68DK2 2539 aa17■□□□□ 0.31
LINC01558-202ENST00000495520 FAM221AA4D161 298 aa16.99■□□□□ 0.31
LINC01558-202ENST00000495520 POM121CA8CG34 1229 aa16.99■□□□□ 0.31
LINC01558-202ENST00000495520 HLA-AP01891 365 aaKnown RBP16.99■□□□□ 0.31
LINC01558-202ENST00000495520 DUSP1P28562 367 aa16.99■□□□□ 0.31
LINC01558-202ENST00000495520 CHRNB4P30926 498 aa16.99■□□□□ 0.31
LINC01558-202ENST00000495520 H2BFSP57053 126 aa16.99■□□□□ 0.31
LINC01558-202ENST00000495520 SRSF4Q08170 494 aaKnown RBP16.99■□□□□ 0.31
LINC01558-202ENST00000495520 TMEM128Q5BJH2 165 aa16.99■□□□□ 0.31
LINC01558-202ENST00000495520 OR2T35Q8NGX2 323 aa16.99■□□□□ 0.31
LINC01558-202ENST00000495520 LIME1Q9H400 295 aa16.99■□□□□ 0.31
LINC01558-202ENST00000495520 FZR1Q9UM11 496 aa16.99■□□□□ 0.31
LINC01558-202ENST00000495520 BOLA1Q9Y3E2 137 aa16.99■□□□□ 0.31
LINC01558-202ENST00000495520 HEATR1Q9H583 2144 aaKnown RBP16.99■□□□□ 0.31
LINC01558-202ENST00000495520 NBASA2RRP1 2371 aa16.98■□□□□ 0.31
LINC01558-202ENST00000495520 IGLV3-9A0A075B6K5 115 aa16.98■□□□□ 0.31
LINC01558-202ENST00000495520 FAM90A27PA6NNH2 459 aa16.98■□□□□ 0.31
LINC01558-202ENST00000495520 DUS4LO95620 317 aaKnown RBP16.98■□□□□ 0.31
LINC01558-202ENST00000495520 GSTT2P0CG29 244 aa16.98■□□□□ 0.31
LINC01558-202ENST00000495520 CD40P25942 277 aa16.98■□□□□ 0.31
LINC01558-202ENST00000495520 Q5BKY6 102 aa16.98■□□□□ 0.31
LINC01558-202ENST00000495520 SHEQ5VZ18 495 aa16.98■□□□□ 0.31
LINC01558-202ENST00000495520 C9orf62Q8N4C0 152 aa16.98■□□□□ 0.31
LINC01558-202ENST00000495520 TMEM171Q8WVE6 324 aa16.98■□□□□ 0.31
LINC01558-202ENST00000495520 PLSCR3Q9NRY6 295 aa16.98■□□□□ 0.31
LINC01558-202ENST00000495520 ERRFI1Q9UJM3 462 aaPredicted RBP16.98■□□□□ 0.31
LINC01558-202ENST00000495520 FAM172BPA6NC97 362 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 F5H5P2 479 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 RGS13O14921 159 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 GRPP07492 148 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 DNASE1P24855 282 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 MZT1Q08AG7 82 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 RBM39Q14498 530 aaKnown RBP16.97■□□□□ 0.31
LINC01558-202ENST00000495520 C4orf17Q53FE4 359 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 LY6G6FQ5SQ64 297 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 ZNF880Q6PDB4 577 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 ZNF2Q9BSG1 426 aaPredicted RBP16.97■□□□□ 0.31
LINC01558-202ENST00000495520 DPCDQ9BVM2 203 aaPredicted RBP16.97■□□□□ 0.31
LINC01558-202ENST00000495520 OPN4Q9UHM6 478 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 CFAP46Q8IYW2 2715 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 A0A0B4J2A0 478 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 DEGS1O15121 323 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 SLC22A5O76082 557 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 PPP3CBP16298 524 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 AKR1C4P17516 323 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 CD34P28906 385 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 CD200P41217 278 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 IL13RA1P78552 427 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 SPIN3Q5JUX0 258 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 LPCAT3Q6P1A2 487 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 SLC22A25Q6T423 547 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 LRP11Q86VZ4 500 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 GAPTQ8N292 157 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 CHIAQ9BZP6 476 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 WDR13Q9H1Z4 485 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 MSL2Q9HCI7 577 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 TREM2Q9NZC2 230 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 SHPKQ9UHJ6 478 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 MGAT4AQ9UM21 535 aa16.97■□□□□ 0.31
LINC01558-202ENST00000495520 DBX1A6NMT0 343 aa16.96■□□□□ 0.31
LINC01558-202ENST00000495520 C3orf80F5H4A9 247 aa16.96■□□□□ 0.31
LINC01558-202ENST00000495520 GOSR2O14653 212 aa16.96■□□□□ 0.31
LINC01558-202ENST00000495520 RGS11O94810 467 aa16.96■□□□□ 0.31
LINC01558-202ENST00000495520 SFT2D2O95562 160 aa16.96■□□□□ 0.31
LINC01558-202ENST00000495520 CTSDP07339 412 aaPredicted RBP16.96■□□□□ 0.31
LINC01558-202ENST00000495520 RPS2P15880 293 aaKnown RBP16.96■□□□□ 0.31
LINC01558-202ENST00000495520 RPS23P62266 143 aaKnown RBP16.96■□□□□ 0.31
LINC01558-202ENST00000495520 DCAF12L2Q5VW00 463 aa16.96■□□□□ 0.31
LINC01558-202ENST00000495520 ALKBH2Q6NS38 261 aa16.96■□□□□ 0.31
LINC01558-202ENST00000495520 NUP37Q8NFH4 326 aa16.96■□□□□ 0.31
LINC01558-202ENST00000495520 CA5BP1Q8WTZ4 195 aa16.96■□□□□ 0.31
LINC01558-202ENST00000495520 WDR89Q96FK6 387 aaPredicted RBP16.96■□□□□ 0.31
LINC01558-202ENST00000495520 CADP27708 2225 aa16.95■□□□□ 0.3
LINC01558-202ENST00000495520 NKX2-6A6NCS4 301 aa16.95■□□□□ 0.3
LINC01558-202ENST00000495520 ATP6V1G2-DDX39BF2Z307 99 aa16.95■□□□□ 0.3
LINC01558-202ENST00000495520 SIX6O95475 246 aa16.95■□□□□ 0.3
LINC01558-202ENST00000495520 THBDP07204 575 aa16.95■□□□□ 0.3
LINC01558-202ENST00000495520 GLRA1P23415 457 aa16.95■□□□□ 0.3
LINC01558-202ENST00000495520 ASCL1P50553 236 aa16.95■□□□□ 0.3
LINC01558-202ENST00000495520 SUPT4H1P63272 117 aaKnown RBP16.95■□□□□ 0.3
LINC01558-202ENST00000495520 WDR82Q6UXN9 313 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms