RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 DUX4L3P0CJ86 424 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 DUX4L4P0CJ87 422 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 DUX4L5P0CJ88 424 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 DUX4L6P0CJ89 424 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 DUX4L7P0CJ90 424 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 AMY2BP19961 511 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 PRTN3P24158 256 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 BCAP31P51572 246 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 CAPZA1P52907 286 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 GPR157Q5UAW9 335 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 METTL11BQ5VVY1 283 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 PLCXD3Q63HM9 321 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 GLT8D1Q68CQ7 371 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 DUX4L9Q6RFH8 374 aaPredicted RBP10.9□□□□□ -0.67
ERCC3-209ENST00000494464 C12orf54Q6X4T0 127 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 ZNF788Q6ZQV5 615 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 GDPD3Q7L5L3 318 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 FAM216BQ8N7L0 139 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 OR14K1Q8NGZ2 314 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 ANGPTL6Q8NI99 470 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 ST8SIA4Q92187 359 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 TRIM63Q969Q1 353 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 SEH1LQ96EE3 360 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 C1orf147Q96MC9 270 aaPredicted RBP10.9□□□□□ -0.67
ERCC3-209ENST00000494464 TBX15Q96SF7 602 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 DNAJB11Q9UBS4 358 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 DUX4Q9UBX2 424 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 KPTNQ9Y664 436 aa10.9□□□□□ -0.67
ERCC3-209ENST00000494464 NDUFB3O43676 98 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 GSTZ1O43708 216 aaPredicted RBP10.89□□□□□ -0.67
ERCC3-209ENST00000494464 RHBDL1O75783 438 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 NRASP01111 189 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 SFTPBP07988 381 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 RNASE1P07998 156 aaKnown RBP10.89□□□□□ -0.67
ERCC3-209ENST00000494464 GLRA1P23415 457 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 RANBP1P43487 201 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 IL13RA1P78552 427 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 BAMBIQ13145 260 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 PDCD1Q15116 288 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 RAB11BQ15907 218 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 LRRC10Q5BKY1 277 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 CLVS2Q5SYC1 327 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 ZNF529Q6P280 563 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 MOB3CQ70IA8 216 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 KIR3DL3Q8N743 410 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 LY6G5BQ8NDX9 201 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 DNAAF1Q8NEP3 725 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 OR6M1Q8NGM8 313 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 C8orf46Q8TAG6 207 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 C15orf40Q8WUR7 153 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 AQP3Q92482 292 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 GCDHQ92947 438 aaPredicted RBP10.89□□□□□ -0.67
ERCC3-209ENST00000494464 FOXRED1Q96CU9 486 aaPredicted RBP10.89□□□□□ -0.67
ERCC3-209ENST00000494464 GAFA1Q96PS6 74 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 PCGF1Q9BSM1 259 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 PRDM13Q9H4Q3 707 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 NLKQ9UBE8 527 aa10.89□□□□□ -0.67
ERCC3-209ENST00000494464 OR2AT4A6NND4 320 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 HAX1O00165 279 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 SIGLEC5O15389 551 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 SULT1B1O43704 296 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 RFX2P48378 723 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 MRPS10P82664 201 aaKnown RBP10.88□□□□□ -0.67
ERCC3-209ENST00000494464 C1orf100Q5SVJ3 147 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 HAGHLQ6PII5 290 aaPredicted RBP10.88□□□□□ -0.67
ERCC3-209ENST00000494464 CCBE1Q6UXH8 406 aaPredicted RBP10.88□□□□□ -0.67
ERCC3-209ENST00000494464 BRD3OSQ6XYD6 125 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 LYPD6Q86Y78 171 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 ZNF573Q86YE8 665 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 SERPINA12Q8IW75 414 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 CMTM4Q8IZR5 234 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 FGFRL1Q8N441 504 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 OR5T2Q8NGG2 359 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 RFT1Q96AA3 541 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 MED30Q96HR3 178 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 ABHD1Q96SE0 405 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 DCTN5Q9BTE1 182 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 CNTD2Q9H8S5 307 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 ZNF222Q9UK12 451 aa10.88□□□□□ -0.67
ERCC3-209ENST00000494464 CENPVL3A0A0U1RRI6 287 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 PQLC2LA1A4F0 135 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 H3BSH0 61 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 J3QT63 122 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 PLA2G10O15496 165 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 NOS1APO75052 506 aaPredicted RBP10.87□□□□□ -0.67
ERCC3-209ENST00000494464 ACAA1P09110 424 aaPredicted RBP10.87□□□□□ -0.67
ERCC3-209ENST00000494464 HKR1P10072 659 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 SELLP14151 372 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 SPNP16150 400 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 ZNF20P17024 532 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 MPZP25189 248 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 CLDN12P56749 244 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 GMFBP60983 142 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 IKZF1Q13422 519 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 DMRTC1Q5HYR2 192 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 NRARPQ7Z6K4 114 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 CDH26Q8IXH8 852 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 POC1AQ8NBT0 407 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 SMIM4Q8WVI0 70 aa10.87□□□□□ -0.67
ERCC3-209ENST00000494464 SLC25A28Q96A46 364 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms