RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 OR4S1Q8NGB4 309 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 OR4D10Q8NGI6 311 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 OR10Z1Q8NGY1 313 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 RDH5Q92781 318 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 RCC2Q9P258 522 aaKnown RBP17.35■□□□□ 0.37
KPNA1-210ENST00000494339 PLEKHA6Q9Y2H5 1048 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 KLF2Q9Y5W3 355 aaPredicted RBP17.35■□□□□ 0.37
KPNA1-210ENST00000494339 C7orf66A4D0T2 115 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 A6NNC1 897 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 PRAF2O60831 178 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 SPIN3Q5JUX0 258 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 OR52W1Q6IF63 320 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 Q6P435 159 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 BPIFB2Q8N4F0 458 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 SUMF2Q8NBJ7 301 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 NEK7Q8TDX7 302 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 CMSS1Q9BQ75 279 aaKnown RBP17.35■□□□□ 0.37
KPNA1-210ENST00000494339 EGLN1Q9GZT9 426 aa17.35■□□□□ 0.37
KPNA1-210ENST00000494339 ZNF230Q9UIE0 474 aaPredicted RBP17.35■□□□□ 0.37
KPNA1-210ENST00000494339 GCN1Q92616 2671 aaKnown RBP17.34■□□□□ 0.37
KPNA1-210ENST00000494339 TRAV24A0A0B4J272 114 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 FAM221AA4D161 298 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.34■□□□□ 0.37
KPNA1-210ENST00000494339 SIRPB1O00241 398 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 CCNKO75909 580 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 OR2H2O95918 312 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 CYB5R3P00387 301 aaPredicted RBP17.34■□□□□ 0.37
KPNA1-210ENST00000494339 TFF1P04155 84 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 MRPS15P82914 257 aaKnown RBP17.34■□□□□ 0.37
KPNA1-210ENST00000494339 RNASE10Q5GAN6 216 aaKnown RBP17.34■□□□□ 0.37
KPNA1-210ENST00000494339 FAM201AQ5SY85 155 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 OR5T2Q8NGG2 359 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 OR51S1Q8NGJ8 323 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 ERGIC1Q969X5 290 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 VRK1Q99986 396 aaPredicted RBP17.34■□□□□ 0.37
KPNA1-210ENST00000494339 ST6GALNAC5Q9BVH7 336 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 ZNF701Q9NV72 531 aaPredicted RBP17.34■□□□□ 0.37
KPNA1-210ENST00000494339 RNF7Q9UBF6 113 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 SCP2D1Q9UJQ7 156 aa17.34■□□□□ 0.37
KPNA1-210ENST00000494339 DISC1C4P0D8 188 aa17.33■□□□□ 0.37
KPNA1-210ENST00000494339 SH2D1BO14796 132 aa17.33■□□□□ 0.37
KPNA1-210ENST00000494339 HAND1O96004 215 aa17.33■□□□□ 0.37
KPNA1-210ENST00000494339 ZMYND11Q15326 602 aa17.33■□□□□ 0.37
KPNA1-210ENST00000494339 ACTBL2Q562R1 376 aa17.33■□□□□ 0.37
KPNA1-210ENST00000494339 MAFIPQ8WZ33 124 aa17.33■□□□□ 0.37
KPNA1-210ENST00000494339 SPACA1Q9HBV2 294 aa17.33■□□□□ 0.37
KPNA1-210ENST00000494339 DCAF16Q9NXF7 216 aa17.33■□□□□ 0.37
KPNA1-210ENST00000494339 DNAJB11Q9UBS4 358 aa17.33■□□□□ 0.37
KPNA1-210ENST00000494339 LRRK2Q5S007 2527 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 HRNRQ86YZ3 2850 aaPredicted RBP17.33■□□□□ 0.36
KPNA1-210ENST00000494339 IGHV3OR15-7A0A075B7D8 119 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 RFPL4AA6NLU0 287 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 MCRIP1C9JLW8 97 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 RFPL4AL1F8VTS6 287 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 H3BUI4 141 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 BOLA2-SMG1P6H3BVE0 249 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 LHBP01229 141 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 AMY2AP04746 511 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 SOD3P08294 240 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 OR11L1Q8NGX0 322 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 Q8TCH9 128 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 SLC25A21Q9BQT8 299 aaPredicted RBP17.33■□□□□ 0.36
KPNA1-210ENST00000494339 GINS4Q9BRT9 223 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 DPCDQ9BVM2 203 aaPredicted RBP17.33■□□□□ 0.36
KPNA1-210ENST00000494339 IFT22Q9H7X7 185 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 RASL12Q9NYN1 266 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 NPTNQ9Y639 398 aa17.33■□□□□ 0.36
KPNA1-210ENST00000494339 A0A0A6YYJ9 748 aa17.32■□□□□ 0.36
KPNA1-210ENST00000494339 M0QYG6 137 aa17.32■□□□□ 0.36
KPNA1-210ENST00000494339 ZNF205O95201 554 aa17.32■□□□□ 0.36
KPNA1-210ENST00000494339 KNG1P01042 644 aa17.32■□□□□ 0.36
KPNA1-210ENST00000494339 MECP2P51608 486 aaKnown RBP17.32■□□□□ 0.36
KPNA1-210ENST00000494339 CD300CQ08708 224 aa17.32■□□□□ 0.36
KPNA1-210ENST00000494339 PRRT1Q99946 306 aa17.32■□□□□ 0.36
KPNA1-210ENST00000494339 TINAGL1Q9GZM7 467 aaPredicted RBP17.32■□□□□ 0.36
KPNA1-210ENST00000494339 GHITMQ9H3K2 345 aa17.32■□□□□ 0.36
KPNA1-210ENST00000494339 CBLN4Q9NTU7 201 aa17.32■□□□□ 0.36
KPNA1-210ENST00000494339 SLC2A8Q9NY64 477 aa17.32■□□□□ 0.36
KPNA1-210ENST00000494339 GLS2Q9UI32 602 aa17.32■□□□□ 0.36
KPNA1-210ENST00000494339 SLC33A1O00400 549 aaPredicted RBP17.31■□□□□ 0.36
KPNA1-210ENST00000494339 ARPC1BO15143 372 aaKnown RBP17.31■□□□□ 0.36
KPNA1-210ENST00000494339 IRF2P14316 349 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 CD80P33681 288 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 RRAS2P62070 204 aaPredicted RBP17.31■□□□□ 0.36
KPNA1-210ENST00000494339 HOGA1Q86XE5 327 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 OR6F1Q8NGZ6 308 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 GIMAP1Q8WWP7 306 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 SNAPC3Q92966 411 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 UBTD1Q9HAC8 227 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 ETAA1Q9NY74 926 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 CD8AP01732 235 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 HPXP02790 462 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 ZNF735P0CB33 412 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 PAN3Q58A45 887 aaKnown RBP17.31■□□□□ 0.36
KPNA1-210ENST00000494339 OR4K15Q8NH41 348 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 MED30Q96HR3 178 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 C12orf4Q9NQ89 552 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 FLVCR2Q9UPI3 526 aa17.31■□□□□ 0.36
KPNA1-210ENST00000494339 OR2AT4A6NND4 320 aa17.3■□□□□ 0.36
KPNA1-210ENST00000494339 DANCRP0C864 163 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms