RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 LOC102723996A0A087X1L8 192 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 EDDM13A0A1B0GTR0 161 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 SMIM30A4D0T7 59 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 SHISA7A6NL88 538 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 TMEM212A6NML5 194 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 PLRG1O43660 514 aaKnown RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 SRPX2O60687 465 aaPredicted RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 MMP10P09238 476 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 CD3GP09693 182 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 TDGF1P13385 188 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 POU2F1P14859 743 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 GDF1P27539 372 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 PSMB5P28074 263 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 IL2RGP31785 369 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 BRS3P32247 399 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 PCP4P48539 62 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 CDH11P55287 796 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 MTCP1P56278 107 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 NTHL1P78549 312 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 TNFRSF17Q02223 184 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 ACSM2AQ08AH3 577 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 C1DQ13901 141 aaKnown RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 IL13RA2Q14627 380 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 CD226Q15762 336 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 KLK9Q2XQG4 91 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 NDUFAF6Q330K2 333 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 SLC22A6Q4U2R8 563 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 PARM1Q6UWI2 310 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 SSX7Q7RTT5 188 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 LINC01551Q86U37 167 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 BAP18Q8IXM2 172 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 GBGT1Q8N5D6 347 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR9Q1Q8NGQ5 310 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 RLN3Q8WXF3 142 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 ADAT1Q9BUB4 502 aaKnown RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 NUDT9Q9BW91 350 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 VCX2Q9H322 139 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 HRH4Q9H3N8 390 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 RHOFQ9HBH0 211 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 ZDHHC4Q9NPG8 344 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 ZC4H2Q9NQZ6 224 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 P4HTMQ9NXG6 502 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 RDH8Q9NYR8 311 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 WWOXQ9NZC7 414 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 THAP10Q9P2Z0 257 aaPredicted RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 KLK9Q9UKQ9 250 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 WIF1Q9Y5W5 379 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 TRAV39A0A0B4J263 110 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 DLEU1O43261 78 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 RAMP3O60896 148 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 POU1F1P28069 291 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 HSD11B1P28845 292 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 CRATP43155 626 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 TMEM50BP56557 158 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 SELENOVP59797 346 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 SNRPEP62304 92 aaKnown RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 PAX2Q02962 417 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 SNTB2Q13425 540 aaKnown RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 PPP1R1AQ13522 171 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 ALKBH1Q13686 389 aaKnown RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 FAM53BQ14153 422 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 TOMM34Q15785 309 aaPredicted RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 IGFBP7Q16270 282 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 LRRC73Q5JTD7 316 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 TRIQKQ629K1 86 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 RFLNAQ6ZTI6 216 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 MTSS1LQ765P7 747 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 Q7L0L9 218 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 TMEM173Q86WV6 379 aaPredicted RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 SAMD12Q8N8I0 201 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR7G2Q8NG99 324 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR5D16Q8NGK9 328 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR13G1Q8NGZ3 307 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 PTPMT1Q8WUK0 201 aaPredicted RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 MRPS31Q92665 395 aaKnown RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 RAB3CQ96E17 227 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 ACY3Q96HD9 319 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 CYYR1Q96J86 154 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR10C1Q96KK4 312 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 WFIKKN1Q96NZ8 548 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 TSPAN32Q96QS1 320 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR8B4Q96RC9 309 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 RIOK2Q9BVS4 552 aaKnown RBP2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 EBPLQ9BY08 206 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 CST11Q9H112 138 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 SLC7A11Q9UPY5 501 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 WDR45Q9Y484 360 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 LY96Q9Y6Y9 160 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 V9GY05 133 aa2.13□□□□□ -2.07
CDC42EP3-205ENST00000494083 WDFY4Q6ZS81 3184 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 BTBD17A6NE02 478 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 HS3ST1O14792 307 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 CRCPO75575 148 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 CLDN7O95471 211 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 HLA-DRB1P01911 266 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 IGKV3-11P04433 115 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 RLN1P04808 185 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 ANXA4P09525 319 aaPredicted RBP2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR8U9P0C7N5 309 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 GZMHP20718 246 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms