RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 ARFGEF1Q9Y6D6 1849 aa3.71□□□□□ -1.82
SMC2-205ENST00000493955 SBF1O95248 1867 aa3.71□□□□□ -1.82
SMC2-205ENST00000493955 SCO1O75880 301 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 SHISA6Q6ZSJ9 500 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 OR2M7Q8NG81 312 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 OR4K2Q8NGD2 314 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 ZNF396Q96N95 335 aaPredicted RBP3.7□□□□□ -1.82
SMC2-205ENST00000493955 ZFP3Q96NJ6 502 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 SERPINB11Q96P15 392 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 CATSPER2Q96P56 530 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 TAS2R5Q9NYW4 299 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 DNAJC27Q9NZQ0 273 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 CCDC88AQ3V6T2 1871 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 IGHV1-3A0A0C4DH29 117 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 C7orf66A4D0T2 115 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 MPZL1O95297 269 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 CMC4P56277 68 aaPredicted RBP3.7□□□□□ -1.82
SMC2-205ENST00000493955 RAB38P57729 211 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 OR2B6P58173 313 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 TAS2R43P59537 309 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 RPL10AP62906 217 aaKnown RBP3.7□□□□□ -1.82
SMC2-205ENST00000493955 ZNF816Q0VGE8 651 aaPredicted RBP3.7□□□□□ -1.82
SMC2-205ENST00000493955 TRDNQ13061 729 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 SHHQ15465 462 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 CEACAM16Q2WEN9 425 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 COX19Q49B96 90 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 HBMQ6B0K9 141 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 ZNF470Q6ECI4 717 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 Q6ZT83 130 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 ZNF101Q8IZC7 436 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 SPICQ8N5J4 248 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 OR2Z1Q8NG97 314 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 IFT81Q8WYA0 676 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 QKIQ96PU8 341 aaKnown RBP eCLIP3.7□□□□□ -1.82
SMC2-205ENST00000493955 MRPL20Q9BYC9 149 aaKnown RBP3.7□□□□□ -1.82
SMC2-205ENST00000493955 NXF2Q9GZY0 626 aaKnown RBP3.7□□□□□ -1.82
SMC2-205ENST00000493955 NRBP2Q9NSY0 501 aa3.7□□□□□ -1.82
SMC2-205ENST00000493955 TTC21AQ8NDW8 1320 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 CACNA1SQ13698 1873 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 ANKRD36BQ8N2N9 1353 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 ADAMTS7Q9UKP4 1686 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 EDC4Q6P2E9 1401 aaKnown RBP3.69□□□□□ -1.82
SMC2-205ENST00000493955 TJP1Q07157 1748 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 TIAM2Q8IVF5 1701 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 LOC102724200A0A096LPH7 203 aaPredicted RBP3.69□□□□□ -1.82
SMC2-205ENST00000493955 A0A0G2JMP0 313 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 A0A0X1KG70 313 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 TMEM72A0PK05 275 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 ZNF850A8MQ14 1090 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 MAS1P04201 325 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 OR4Q2P0C623 313 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 MAGEA3P43357 314 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 SLC18A1P54219 525 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 EIF4EBP1Q13541 118 aaPredicted RBP3.69□□□□□ -1.82
SMC2-205ENST00000493955 BSXQ3C1V8 233 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 ERICH5Q6P6B1 374 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 ZNF880Q6PDB4 577 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 SELENOHQ8IZQ5 122 aaKnown RBP3.69□□□□□ -1.82
SMC2-205ENST00000493955 ORMDL3Q8N138 153 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 RNF10Q8N5U6 811 aaKnown RBP3.69□□□□□ -1.82
SMC2-205ENST00000493955 LRRC52Q8N7C0 313 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 SMIM8Q96KF7 97 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 SPACA5Q96QH8 159 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 SPIN2AQ99865 258 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 SPIN2BQ9BPZ2 258 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 IFT46Q9NQC8 304 aa3.69□□□□□ -1.82
SMC2-205ENST00000493955 BAZ2AQ9UIF9 1905 aaKnown RBP3.69□□□□□ -1.82
SMC2-205ENST00000493955 EVC2Q86UK5 1308 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 ROCK2O75116 1388 aaKnown RBP3.68□□□□□ -1.82
SMC2-205ENST00000493955 DLEC1Q9Y238 1755 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 AFDNP55196 1824 aaKnown RBP3.68□□□□□ -1.82
SMC2-205ENST00000493955 PXDNLA1KZ92 1463 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 LOXHD1Q8IVV2 1947 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 TNRC6CQ9HCJ0 1690 aaKnown RBP3.68□□□□□ -1.82
SMC2-205ENST00000493955 IGKV2-28A0A075B6P5 120 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 UPK1AO00322 258 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 CDIPTO14735 213 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 SHOX2O60902 331 aaPredicted RBP3.68□□□□□ -1.82
SMC2-205ENST00000493955 DHRS3O75911 302 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 IGKV2D-28P01615 120 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 RLN2P04090 185 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 OR4D1Q15615 310 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 TRAM1Q15629 374 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 COMTD1Q86VU5 262 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 CYP4Z1Q86W10 505 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 OR4K17Q8NGC6 315 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 CLHC1Q8NHS4 586 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 ORAOV1Q8WV07 137 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 OR5P2Q8WZ92 322 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 GTF2H4Q92759 462 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 ZMYND19Q96E35 227 aaPredicted RBP3.68□□□□□ -1.82
SMC2-205ENST00000493955 MARVELD1Q9BSK0 173 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 ZSCAN16Q9H4T2 348 aaPredicted RBP3.68□□□□□ -1.82
SMC2-205ENST00000493955 METTL8Q9H825 291 aaKnown RBP3.68□□□□□ -1.82
SMC2-205ENST00000493955 ABCB9Q9NP78 766 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 CA10Q9NS85 328 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 FADS3Q9Y5Q0 445 aa3.68□□□□□ -1.82
SMC2-205ENST00000493955 GOLGA8IPA6NC78 632 aa3.67□□□□□ -1.82
SMC2-205ENST00000493955 IL4P05112 153 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms