RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 OR4D6Q8NGJ1 314 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 OR2G2Q8NGZ5 317 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 SPSB1Q96BD6 273 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 SLC7A6OSQ96CW6 309 aaPredicted RBP13.8□□□□□ -0.2
COL9A1-210ENST00000493682 OPALINQ96PE5 141 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 CIB1Q99828 191 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 COMMD4Q9H0A8 199 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 GABARAPL1Q9H0R8 117 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 PCDHGB5Q9Y5G0 923 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 A0A087X0M5 115 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 A0A1B0GX30 115 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 PSMB11A5LHX3 300 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 OOSP1A8MZH6 123 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 KDM4BO94953 1096 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 CSN2P05814 226 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 MNDAP41218 407 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 OR3A4PP47883 348 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 RBM39Q14498 530 aaKnown RBP13.79□□□□□ -0.2
COL9A1-210ENST00000493682 ETV3LQ6ZN32 361 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 RNF144BQ7Z419 303 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 ZDHHC13Q8IUH4 622 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 MRPL41Q8IXM3 137 aaKnown RBP13.79□□□□□ -0.2
COL9A1-210ENST00000493682 EME1Q96AY2 570 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 COQ2Q96H96 371 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 SPACA5Q96QH8 159 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 MBOAT4Q96T53 435 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 ING3Q9NXR8 418 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 FRRS1LQ9P0K9 344 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 ENOPH1Q9UHY7 261 aa13.79□□□□□ -0.2
COL9A1-210ENST00000493682 ISG15P05161 165 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 FAM106CPP0CH98 169 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 VSIG8P0DPA2 414 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 ZNF44P15621 663 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 CD69Q07108 199 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 TMED1Q13445 227 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 C17orf58Q2M2W7 97 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 KRBOX4Q5JUW0 171 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 Q6P435 159 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 ZNF329Q86UD4 541 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 OR5D18Q8NGL1 313 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 OR8J1Q8NGP2 316 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 DPF1Q92782 380 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 ZNF649Q9BS31 505 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 GPR61Q9BZJ8 451 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 MOB4Q9Y3A3 225 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 HSPE1-MOB4S4R3N1 261 aa13.78□□□□□ -0.2
COL9A1-210ENST00000493682 ZNF729A6NN14 1252 aaPredicted RBP13.77□□□□□ -0.21
COL9A1-210ENST00000493682 E9PQ18 207 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 SLC33A1O00400 549 aaPredicted RBP13.77□□□□□ -0.21
COL9A1-210ENST00000493682 MT-ND2P03891 347 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 OCM2P0CE71 109 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 OCMP0CE72 109 aaPredicted RBP13.77□□□□□ -0.21
COL9A1-210ENST00000493682 NFYBP25208 207 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 NANOS3P60323 173 aaKnown RBP13.77□□□□□ -0.21
COL9A1-210ENST00000493682 ATXN7L3Q14CW9 347 aaPredicted RBP13.77□□□□□ -0.21
COL9A1-210ENST00000493682 KIAA2026Q5HYC2 2103 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 FDX2Q6P4F2 183 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 AMIGO2Q86SJ2 522 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 THNSL2Q86YJ6 484 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 SAXO1Q8IYX7 474 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 CHST4Q8NCG5 386 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 OR51D1Q8NGF3 324 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 OR10AC1Q8NH08 325 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 RFKQ969G6 155 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 B9D2Q9BPU9 175 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 PPIL3Q9H2H8 161 aaKnown RBP13.77□□□□□ -0.21
COL9A1-210ENST00000493682 NEK6Q9HC98 313 aa13.77□□□□□ -0.21
COL9A1-210ENST00000493682 KBTBD11-OT1A0A1B0GTJ5 212 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 FAM90A18PA6NE21 464 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 FAM90A16PA6NEW6 464 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 FAM90A20PA6NIJ5 464 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 FAM90A9PA6NNJ1 464 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 FAM90A12PA8MX19 464 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 FAM90A5PA8MXJ8 464 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 SNRNP70P08621 437 aaKnown RBP13.76□□□□□ -0.21
COL9A1-210ENST00000493682 FAM90A15PP0C7V4 464 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 FAM90A13PP0C7W8 464 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 FAM90A14PP0C7W9 464 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 FAM90A24PP0C7X0 464 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 FASP25445 335 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 THBS3P49746 956 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 RPL23AP62750 156 aaKnown RBP13.76□□□□□ -0.21
COL9A1-210ENST00000493682 OR2W3Q7Z3T1 314 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 KCTD20Q7Z5Y7 419 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 OR51A4Q8NGJ6 313 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 OR13C9Q8NGT0 318 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 OR9G1Q8NH87 305 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 TOMM40LQ969M1 308 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 RPEQ96AT9 228 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 KIRREL1Q96J84 757 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 GABARAPL3Q9BY60 117 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 RIBC2Q9H4K1 309 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 RHOFQ9HBH0 211 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 PCDHB16Q9NRJ7 776 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 OR6C3Q9NZP0 311 aa13.76□□□□□ -0.21
COL9A1-210ENST00000493682 DEGS1O15121 323 aa13.75□□□□□ -0.21
COL9A1-210ENST00000493682 CCDC159P0C7I6 412 aa13.75□□□□□ -0.21
COL9A1-210ENST00000493682 CGB3P0DN86 165 aa13.75□□□□□ -0.21
COL9A1-210ENST00000493682 CGB7P0DN87 165 aa13.75□□□□□ -0.21
COL9A1-210ENST00000493682 CDK5R1Q15078 307 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms