RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 MRI1Q9BV20 369 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 C6orf62Q9GZU0 229 aaPredicted RBP14.3□□□□□ -0.12
LIME1-208ENST00000493265 PPA2Q9H2U2 334 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 LPAR2Q9HBW0 351 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 RHBDL2Q9NX52 303 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 FBLN5Q9UBX5 448 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 HIVEP2P31629 2446 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 CSPG4Q6UVK1 2322 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 A0A075B6Q4 140 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 TRAV24A0A0B4J272 114 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 METTL21EPA6NDL7 271 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 SLC33A1O00400 549 aaPredicted RBP14.29□□□□□ -0.12
LIME1-208ENST00000493265 RGS5O15539 181 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 PHF1O43189 567 aaPredicted RBP14.29□□□□□ -0.12
LIME1-208ENST00000493265 PSPNO60542 156 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 HPGDSO60760 199 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 TMEM127O75204 238 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 BLVRBP30043 206 aaPredicted RBP14.29□□□□□ -0.12
LIME1-208ENST00000493265 GNB2P62879 340 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 EDDM3AQ14507 147 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 MPV17LQ2QL34 196 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 ESCO2Q56NI9 601 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 LRRC10Q5BKY1 277 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 RAB12Q6IQ22 244 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 LINC00596Q86U02 117 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 RTN4RL2Q86UN3 420 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 SUMF2Q8NBJ7 301 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 CHST4Q8NCG5 386 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 OR4S1Q8NGB4 309 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 MCFD2Q8NI22 146 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 H1FXQ92522 213 aaKnown RBP14.29□□□□□ -0.12
LIME1-208ENST00000493265 SLC25A38Q96DW6 304 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 NEDD4LQ96PU5 975 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 TM2D1Q9BX74 207 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 DNTTIP1Q9H147 329 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 SLC25A10Q9UBX3 287 aaPredicted RBP14.29□□□□□ -0.12
LIME1-208ENST00000493265 CLN8Q9UBY8 286 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 PEX16Q9Y5Y5 336 aa14.29□□□□□ -0.12
LIME1-208ENST00000493265 UBE2QL1A1L167 161 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 FAM25AB3EWG3 89 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 FAM25CB3EWG5 89 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 FAM25GB3EWG6 89 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 F5H0A9 414 aaPredicted RBP14.28□□□□□ -0.12
LIME1-208ENST00000493265 MADCAM1Q13477 382 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 ATXN7L3Q14CW9 347 aaPredicted RBP14.28□□□□□ -0.12
LIME1-208ENST00000493265 GRK1Q15835 563 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 MOGAT2Q3SYC2 334 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 UBE2NLQ5JXB2 153 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 SIGIRRQ6IA17 410 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 C17orf107Q6ZR85 190 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 CMTM4Q8IZR5 234 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 OR56B1Q8NGI3 324 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 PTX4Q96A99 478 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 PHF21AQ96BD5 680 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 SNX22Q96L94 193 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 DPCDQ9BVM2 203 aaPredicted RBP14.28□□□□□ -0.12
LIME1-208ENST00000493265 SLIRPQ9GZT3 109 aaKnown RBP14.28□□□□□ -0.12
LIME1-208ENST00000493265 KAAG1Q9UBP8 84 aa14.28□□□□□ -0.12
LIME1-208ENST00000493265 A0A096LNT2 108 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 FAM157AC9JC47 383 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 CTDSP2O14595 271 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 PDCD6O75340 191 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 ZNF737O75373 536 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 FCN3O75636 299 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 TK1P04183 234 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 EIF4EP06730 217 aaKnown RBP14.27□□□□□ -0.13
LIME1-208ENST00000493265 FUT3P21217 361 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 OR3A1P47881 315 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 SCAND1P57086 179 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 LCN2P80188 198 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 LOXL1Q08397 574 aaPredicted RBP14.27□□□□□ -0.13
LIME1-208ENST00000493265 CNPY1Q3B7I2 92 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 ZNF841Q6ZN19 808 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 GDPD3Q7L5L3 318 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 C6orf201Q7Z4U5 140 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 IZUMO1Q8IYV9 350 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 OR4M1Q8NGD0 313 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 DYRK2Q92630 601 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 SSBP3Q9BWW4 388 aaPredicted RBP14.27□□□□□ -0.13
LIME1-208ENST00000493265 PLEKHJ1Q9NW61 149 aa14.27□□□□□ -0.13
LIME1-208ENST00000493265 MEX3AA1L020 520 aaKnown RBP14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A10PA6NDY2 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A18PA6NE21 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A16PA6NEW6 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A20PA6NIJ5 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A8PA6NJQ4 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A7PA6NKC0 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A22PA8MWA6 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A12PA8MX19 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A5PA8MXJ8 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A23PA8MXZ1 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 MCRIP1C9JLW8 97 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 K7N7A8 449 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A15PP0C7V4 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A13PP0C7W8 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A14PP0C7W9 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 FAM90A24PP0C7X0 464 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 ELK1P19419 428 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 LMO1P25800 156 aa14.26□□□□□ -0.13
LIME1-208ENST00000493265 CHATP28329 748 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms