RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CDIPTO14735 213 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 DEGS1O15121 323 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 MLNRO43193 412 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 CTSDP07339 412 aaPredicted RBP11.92□□□□□ -0.5
PTPN7-216ENST00000492977 GLRA1P23415 457 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 DUSP1P28562 367 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 GMFBP60983 142 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 BAMBIQ13145 260 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 NDUFA5Q16718 116 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 Q6P435 159 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 Q6ZPA2 131 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 ZGRF1Q86YA3 2104 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 NEK7Q8TDX7 302 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 CASTOR1Q8WTX7 329 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 DPCDQ9BVM2 203 aaPredicted RBP11.92□□□□□ -0.5
PTPN7-216ENST00000492977 TLNRD1Q9H1K6 362 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 PTPRQQ9UMZ3 2332 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 MGAQ8IWI9 3026 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 TRAV24A0A0B4J272 114 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 KIR2DS1A0A191URI9 304 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 HMSDA8MTL9 139 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 DLL1O00548 723 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 SIAH2O43255 324 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 CD8AP01732 235 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 GRPP07492 148 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 ZNF250P15622 560 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 C4BPBP20851 252 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 GLRXP35754 106 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 GLP1RP43220 463 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 KIR2DS4P43632 304 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 UCP3P55916 312 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 TAGLNQ01995 201 aaKnown RBP11.92□□□□□ -0.5
PTPN7-216ENST00000492977 FGL1Q08830 312 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 FAM27E3Q08E93 113 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 KIR2DS1Q14954 304 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 ZNF146Q15072 292 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 IGFBP7Q16270 282 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 SPIN3Q5JUX0 258 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 CLEC18BQ6UXF7 455 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 Q6ZR03 302 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 SSX8Q7RTT4 187 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 POC1AQ8NBT0 407 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 WDR89Q96FK6 387 aaPredicted RBP11.92□□□□□ -0.5
PTPN7-216ENST00000492977 TREM2Q9NZC2 230 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 SLC23A1Q9UHI7 598 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 C16orf97H3BN30 126 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 HS3ST1O14792 307 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 SH2D1BO14796 132 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 ATP6V1G1O75348 118 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 NXPH2O95156 264 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 PI3P19957 117 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 NFYAP23511 347 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-216ENST00000492977 FCGR2CP31995 323 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 MDH2P40926 338 aaKnown RBP11.91□□□□□ -0.5
PTPN7-216ENST00000492977 SUPT4H1P63272 117 aaKnown RBP11.91□□□□□ -0.5
PTPN7-216ENST00000492977 NKX6-1P78426 367 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-216ENST00000492977 PRR30Q53SZ7 412 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-216ENST00000492977 FIP1L1Q6UN15 594 aaKnown RBP11.91□□□□□ -0.5
PTPN7-216ENST00000492977 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 C11orf53Q8IXP5 236 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 COQ8AQ8NI60 647 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 LIME1Q9H400 295 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 HES4Q9HCC6 221 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 JKAMPQ9P055 326 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 FZR1Q9UM11 496 aa11.91□□□□□ -0.5
PTPN7-216ENST00000492977 DCHS1Q96JQ0 3298 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 RFPL4AA6NLU0 287 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 TRDCB7Z8K6 153 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 RFPL4AL1F8VTS6 287 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 H7C1Q1 480 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 IGHV3-13P01766 116 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 CTXN2P0C2S0 81 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 ZNF728P0DKX0 622 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 ZNF44P15621 663 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 RPS2P15880 293 aaKnown RBP11.9□□□□□ -0.5
PTPN7-216ENST00000492977 ZNF81P51508 661 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 RPS23P62266 143 aaKnown RBP11.9□□□□□ -0.5
PTPN7-216ENST00000492977 SHEQ5VZ18 495 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 KCTD9Q7L273 389 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 RDH5Q92781 318 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 MOB3AQ96BX8 217 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 PIK3IP1Q96FE7 263 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 PDCD10Q9BUL8 212 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 RAB18Q9NP72 206 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 ATP23Q9Y6H3 246 aa11.9□□□□□ -0.5
PTPN7-216ENST00000492977 HSPB6O14558 160 aa11.89□□□□□ -0.51
PTPN7-216ENST00000492977 KNG1P01042 644 aa11.89□□□□□ -0.51
PTPN7-216ENST00000492977 IFNA2P01563 188 aa11.89□□□□□ -0.51
PTPN7-216ENST00000492977 SEC61A1P61619 476 aaKnown RBP11.89□□□□□ -0.51
PTPN7-216ENST00000492977 SLC9A3R2Q15599 337 aa11.89□□□□□ -0.51
PTPN7-216ENST00000492977 ALKBH2Q6NS38 261 aa11.89□□□□□ -0.51
PTPN7-216ENST00000492977 ZNF880Q6PDB4 577 aa11.89□□□□□ -0.51
PTPN7-216ENST00000492977 ZNF767PQ75MW2 155 aa11.89□□□□□ -0.51
PTPN7-216ENST00000492977 SGPP2Q8IWX5 399 aa11.89□□□□□ -0.51
PTPN7-216ENST00000492977 MRPL30Q8TCC3 161 aaKnown RBP11.89□□□□□ -0.51
PTPN7-216ENST00000492977 VKORC1Q9BQB6 163 aa11.89□□□□□ -0.51
PTPN7-216ENST00000492977 MSL2Q9HCI7 577 aa11.89□□□□□ -0.51
PTPN7-216ENST00000492977 GLS2Q9UI32 602 aa11.89□□□□□ -0.51
PTPN7-216ENST00000492977 CRYM-AS1A6NIL9 109 aa11.88□□□□□ -0.51
PTPN7-216ENST00000492977 A6NJY4 79 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms