RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 BEAN1Q3B7T3 259 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 NSUN5P1Q3KNT7 163 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 ZIK1Q3SY52 487 aaPredicted RBP10.01□□□□□ -0.81
COL6A1-205ENST00000492851 FBLN7Q53RD9 439 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 KRBOX4Q5JUW0 171 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 LDLRAD2Q5SZI1 272 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 SAMD5Q5TGI4 173 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 CBR4Q8N4T8 237 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 PARP16Q8N5Y8 322 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 OR4P4Q8NGL7 312 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 OR13C9Q8NGT0 318 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 OR5AK2Q8NH90 309 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 R3HDM4Q96D70 268 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 LGALS12Q96DT0 336 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 BARHL1Q9BZE3 327 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 NCOR1P1Q9H4R4 102 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 PCDHB16Q9NRJ7 776 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 IL36RNQ9UBH0 155 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 RPL36Q9Y3U8 105 aaKnown RBP10.01□□□□□ -0.81
COL6A1-205ENST00000492851 TET2Q6N021 2002 aaPredicted RBP10□□□□□ -0.81
COL6A1-205ENST00000492851 A0A087X0M5 115 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 IGKV1-12A0A0C4DH73 117 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 A0A1B0GX30 115 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 ODAMA1E959 279 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 G3V4G9 280 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 IGKV1D-12P01611 117 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 IGLV1-47P01700 117 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 FAM106CPP0CH98 169 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 C21orf33P30042 268 aaPredicted RBP10□□□□□ -0.81
COL6A1-205ENST00000492851 KCNJ3P48549 501 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 HABP2Q14520 560 aaPredicted RBP10□□□□□ -0.81
COL6A1-205ENST00000492851 ELP2Q6IA86 826 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 CENPVQ7Z7K6 275 aaPredicted RBP10□□□□□ -0.81
COL6A1-205ENST00000492851 LHFPL3Q86UP9 236 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 PXT1Q8NFP0 134 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 OR51A4Q8NGJ6 313 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 RHOXF1Q8NHV9 184 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 WIPF2Q8TF74 440 aaPredicted RBP10□□□□□ -0.81
COL6A1-205ENST00000492851 RFT1Q96AA3 541 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 DHDHQ9UQ10 334 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 MYRFQ9Y2G1 1151 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 TGP01266 2768 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 NOTCH1P46531 2555 aa10□□□□□ -0.81
COL6A1-205ENST00000492851 BUB1B-PAK6H3BSN5 160 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 SLC33A1O00400 549 aaPredicted RBP9.99□□□□□ -0.81
COL6A1-205ENST00000492851 OR2F2O95006 317 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 ZFPL1O95159 310 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 CD2P06729 351 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 CALCBP10092 127 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 GABRB1P18505 474 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 RAB3AP20336 220 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 GLIPR1P48060 266 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 CCDC58Q4VC31 144 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 Q6P435 159 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 SLC16A12Q6ZSM3 486 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 CCDC121Q6ZUS5 278 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 OR5AU1Q8NGC0 362 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 OR51T1Q8NGJ9 327 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 OR5D18Q8NGL1 313 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 OR9G1Q8NH87 305 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 RBM14Q96PK6 669 aaKnown RBP9.99□□□□□ -0.81
COL6A1-205ENST00000492851 CITED2Q99967 270 aaPredicted RBP9.99□□□□□ -0.81
COL6A1-205ENST00000492851 OCSTAMPQ9BR26 566 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 MRPS18AQ9NVS2 196 aaKnown RBP9.99□□□□□ -0.81
COL6A1-205ENST00000492851 ERVK13-1Q9NX77 482 aa9.99□□□□□ -0.81
COL6A1-205ENST00000492851 AMMECR1Q9Y4X0 333 aaPredicted RBP9.99□□□□□ -0.81
COL6A1-205ENST00000492851 KBTBD11-OT1A0A1B0GTJ5 212 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 LOC100130705A0A1B0GUX0 176 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 IRGMA1A4Y4 181 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 H3BNX3 289 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 MMP23AO75900 390 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 CD83Q01151 205 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 HLA-DRB5Q30154 266 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 PRAMEF5Q5TYX0 476 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 ZNF691Q5VV52 312 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 LPCAT4Q643R3 524 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 THNSL2Q86YJ6 484 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 WFDC9Q8NEX5 89 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 OR10A7Q8NGE5 316 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 OR4X2Q8NGF9 303 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 OR10AC1Q8NH08 325 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 TSEN15Q8WW01 171 aaKnown RBP9.98□□□□□ -0.81
COL6A1-205ENST00000492851 SPACA5Q96QH8 159 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 OR5M11Q96RB7 305 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 GPER1Q99527 375 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 SLC25A33Q9BSK2 321 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 MMP28Q9H239 520 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 ISG20L2Q9H9L3 353 aaKnown RBP9.98□□□□□ -0.81
COL6A1-205ENST00000492851 NECAP2Q9NVZ3 263 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 PAK1IP1Q9NWT1 392 aaPredicted RBP9.98□□□□□ -0.81
COL6A1-205ENST00000492851 CMYA5Q8N3K9 4069 aa9.98□□□□□ -0.81
COL6A1-205ENST00000492851 H0YJX3 145 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 PF4V1P10720 104 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 ZP1P60852 638 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 PAX5Q02548 391 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 IL13RA2Q14627 380 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 CDK5R1Q15078 307 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 RSU1Q15404 277 aa9.97□□□□□ -0.81
COL6A1-205ENST00000492851 PAN3Q58A45 887 aaKnown RBP9.97□□□□□ -0.81
COL6A1-205ENST00000492851 TPTE2P1Q5T6R2 138 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms