RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 TMEM129A0AVI4 362 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 BTBD17A6NE02 478 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 PRSS47A8MTI9 375 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 PPP5D1E7EU14 171 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 MT-ND4LP03901 98 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 OR10A3P58181 314 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 GNB2P62879 340 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF92Q03936 586 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 TLE4Q04727 773 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 RIPPLY2Q5TAB7 128 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CST9LP1Q5W188 147 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 RPUSD3Q6P087 351 aaKnown RBP3.88□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF474Q6S9Z5 364 aaPredicted RBP3.88□□□□□ -1.79
TRA2B-215ENST00000492417 LINC00114Q6XXX2 140 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 ACOT7LQ6ZUV0 252 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 GLCCI1Q86VQ1 547 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 FAM185AQ8N0U4 392 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 MUC15Q8N387 334 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 Q8NA96 180 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CPEB3Q8NE35 698 aaKnown RBP3.88□□□□□ -1.79
TRA2B-215ENST00000492417 OR51A4Q8NGJ6 313 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF519Q8TB69 540 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 LRRC29Q8WV35 223 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 RBMXL1Q96E39 390 aaKnown RBP3.88□□□□□ -1.79
TRA2B-215ENST00000492417 ST6GAL2Q96JF0 529 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 USB1Q9BQ65 265 aaKnown RBP3.88□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF251Q9BRH9 671 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF426Q9BUY5 554 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 JAM3Q9BX67 310 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 SUCNR1Q9BXA5 334 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 SLC25A31Q9H0C2 315 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 PARP12Q9H0J9 701 aaKnown RBP3.88□□□□□ -1.79
TRA2B-215ENST00000492417 PRORYQ9H606 182 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 PLEKHA3Q9HB20 300 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 WASF3Q9UPY6 502 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 FBXO7Q9Y3I1 522 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 COL4A2P08572 1712 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 USP9YO00507 2555 aaPredicted RBP3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CELSR3Q9NYQ7 3312 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 TMEM235A6NFC5 223 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 UMAD1C9J7I0 102 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CCSO14618 274 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 DEGS1O15121 323 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 TCAPO15273 167 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CEACAM4O75871 244 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 LYPD3O95274 346 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 IGHV3-13P01766 116 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 IGHV3-7P01780 117 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CD40P25942 277 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 PAX6P26367 422 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 TIMP3P35625 211 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 GSK3AP49840 483 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 TAS2R30P59541 319 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 DGCR2P98153 550 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 NAAAQ02083 359 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 C4orf17Q53FE4 359 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 TIMM23BQ5SRD1 257 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 SP5Q6BEB4 398 aaPredicted RBP3.88□□□□□ -1.79
TRA2B-215ENST00000492417 FBXW12Q6X9E4 464 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF826PQ6ZT77 177 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 C1orf87Q8N0U7 546 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 FAM58AQ8N1B3 248 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 SYS1Q8N2H4 156 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 ADPRHL1Q8NDY3 354 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 MITD1Q8WV92 249 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 SMIM19Q96E16 107 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 SORCS2Q96PQ0 1159 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 WNT5BQ9H1J7 359 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 PRO1933Q9H354 126 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CHODLQ9H9P2 273 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 BCO1Q9HAY6 547 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 SLC17A5Q9NRA2 495 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 SERTAD4Q9NUC0 356 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 GNG12Q9UBI6 72 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 FAM215AQ9Y5M1 114 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 MGAQ8IWI9 3026 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 JMJD1CQ15652 2540 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 IGHV3OR15-7A0A075B7D8 119 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 LEUTXA8MZ59 168 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 MCRIP1C9JLW8 97 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 BET1O15155 118 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CNOT4O95628 575 aaKnown RBP3.88□□□□□ -1.79
TRA2B-215ENST00000492417 FGF7P21781 194 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 OMGP23515 440 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 IL2RGP31785 369 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 RPS4XP62701 263 aaKnown RBP3.88□□□□□ -1.79
TRA2B-215ENST00000492417 RPL23AP62750 156 aaKnown RBP3.88□□□□□ -1.79
TRA2B-215ENST00000492417 FABP5Q01469 135 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 TNK1Q13470 666 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 GABRA6Q16445 453 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 SNAI3Q3KNW1 292 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 ABLIM2Q6H8Q1 611 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 LPCAT3Q6P1A2 487 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 GTF2H5Q6ZYL4 71 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 SMIM15Q7Z3B0 74 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 CDC20BQ86Y33 519 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 BAP18Q8IXM2 172 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 OR52I2Q8NH67 350 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 OR1S1Q8NH92 325 aa3.88□□□□□ -1.79
TRA2B-215ENST00000492417 RNF133Q8WVZ7 376 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms