RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 IFT22Q9H7X7 185 aa11.38□□□□□ -0.59
NUP188-208ENST00000491502 DECR2Q9NUI1 292 aa11.38□□□□□ -0.59
NUP188-208ENST00000491502 KLK11Q9UBX7 282 aa11.38□□□□□ -0.59
NUP188-208ENST00000491502 SETD2Q9BYW2 2564 aaPredicted RBP11.37□□□□□ -0.59
NUP188-208ENST00000491502 FOXI3A8MTJ6 420 aaPredicted RBP11.37□□□□□ -0.59
NUP188-208ENST00000491502 C17orf100A8MU93 164 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 ZNF736B4DX44 427 aaPredicted RBP11.37□□□□□ -0.59
NUP188-208ENST00000491502 DEGS1O15121 323 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 PLA2G10O15496 165 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 GLRA1P23415 457 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 CHATP28329 748 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 ERVK11-1P61568 191 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 MAB21L1Q13394 359 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 IKZF1Q13422 519 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 PIGYQ3MUY2 71 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 PLAC9Q5JTB6 97 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 PLET1Q6UQ28 207 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 Q6ZNX1 250 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 ST8SIA4Q92187 359 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 GTF3AQ92664 365 aaKnown RBP11.37□□□□□ -0.59
NUP188-208ENST00000491502 REG4Q9BYZ8 158 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 RAB1BQ9H0U4 201 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 ZMAT3Q9HA38 289 aaKnown RBP11.37□□□□□ -0.59
NUP188-208ENST00000491502 C1orf123Q9NWV4 160 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 NPTNQ9Y639 398 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 VPS13CQ709C8 3753 aa11.37□□□□□ -0.59
NUP188-208ENST00000491502 ZNF469Q96JG9 3925 aaPredicted RBP11.37□□□□□ -0.59
NUP188-208ENST00000491502 ARFGEF3Q5TH69 2177 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 MEIOCA2RUB1 952 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 DISC1C4P0D8 188 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 LANCL1O43813 399 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 RHBDL1O75783 438 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 IGHV1-46P01743 117 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 IFNA6P05013 189 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 HEXAP06865 529 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 DTYMKP23919 212 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 MDH2P40926 338 aaKnown RBP11.36□□□□□ -0.59
NUP188-208ENST00000491502 PPOXP50336 477 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 TAS2R46P59540 309 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 ZNF146Q15072 292 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 MSMPQ1L6U9 139 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 TMEM255AQ5JRV8 349 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 OLFML2AQ68BL7 652 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 WDR82Q6UXN9 313 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 GDPD3Q7L5L3 318 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 WDR86Q86TI4 376 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 C1orf87Q8N0U7 546 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 DUSP18Q8NEJ0 188 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 PPP1R35Q8TAP8 253 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 SMR3AQ99954 134 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 CMSS1Q9BQ75 279 aaKnown RBP11.36□□□□□ -0.59
NUP188-208ENST00000491502 SEBOXQ9HB31 216 aaPredicted RBP11.36□□□□□ -0.59
NUP188-208ENST00000491502 MYOZ1Q9NP98 299 aaPredicted RBP11.36□□□□□ -0.59
NUP188-208ENST00000491502 C2CD3Q4AC94 2353 aa11.36□□□□□ -0.59
NUP188-208ENST00000491502 RNF223E7ERA6 249 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 RAB3DO95716 219 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 LY6G6DO95868 133 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 KNG1P01042 644 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 PTHLHP12272 177 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 ZNF44P15621 663 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 SLC25A16P16260 332 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 KCNJ3P48549 501 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 GUCA2AQ02747 115 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 ZMYND11Q15326 602 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 RNASE10Q5GAN6 216 aaKnown RBP11.35□□□□□ -0.59
NUP188-208ENST00000491502 PRAMEF6Q5VXH4 476 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 STEAP1BQ6NZ63 245 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 CCBE1Q6UXH8 406 aaPredicted RBP11.35□□□□□ -0.59
NUP188-208ENST00000491502 C6orf201Q7Z4U5 140 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 NRARPQ7Z6K4 114 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 TMEM17Q86X19 198 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 Q8TCH9 128 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 NEK7Q8TDX7 302 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 LRRC29Q8WV35 223 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 NUDCD2Q8WVJ2 157 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 ITLN1Q8WWA0 313 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 NEU4Q8WWR8 484 aaPredicted RBP11.35□□□□□ -0.59
NUP188-208ENST00000491502 FAM168AQ92567 244 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 GCDHQ92947 438 aaPredicted RBP11.35□□□□□ -0.59
NUP188-208ENST00000491502 CREB3L1Q96BA8 519 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 VRK1Q99986 396 aaPredicted RBP11.35□□□□□ -0.59
NUP188-208ENST00000491502 HES4Q9HCC6 221 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 HRASLSQ9HDD0 168 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 C12orf4Q9NQ89 552 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 UFSP2Q9NUQ7 469 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 MCUBQ9NWR8 336 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 RCC2Q9P258 522 aaKnown RBP11.35□□□□□ -0.59
NUP188-208ENST00000491502 RNF7Q9UBF6 113 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 SCP2D1Q9UJQ7 156 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 MGAT4AQ9UM21 535 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 NUBP2Q9Y5Y2 271 aa11.35□□□□□ -0.59
NUP188-208ENST00000491502 NAT1P18440 290 aa11.34□□□□□ -0.59
NUP188-208ENST00000491502 SLC6A1P30531 599 aa11.34□□□□□ -0.59
NUP188-208ENST00000491502 OR3A3P47888 321 aa11.34□□□□□ -0.59
NUP188-208ENST00000491502 PDLIM4P50479 330 aa11.34□□□□□ -0.59
NUP188-208ENST00000491502 SNU13P55769 128 aaKnown RBP11.34□□□□□ -0.59
NUP188-208ENST00000491502 SRSF7Q16629 238 aaKnown RBP eCLIP11.34□□□□□ -0.59
NUP188-208ENST00000491502 ZNF782Q6ZMW2 699 aaPredicted RBP11.34□□□□□ -0.59
NUP188-208ENST00000491502 ACP7Q6ZNF0 438 aa11.34□□□□□ -0.59
NUP188-208ENST00000491502 MOGAT3Q86VF5 341 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms