RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 LRP4O75096 1905 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RTTNQ86VV8 2226 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 IGLV3-12A0A075B6K2 115 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 IGHV4OR15-8A0A075B7B6 117 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A087WWC5 75 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A087WYN8 130 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 IGKV3D-11A0A0A0MRZ8 115 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 IGLV3-32A0A0A0MS00 114 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 IGHV5-51A0A0C4DH38 117 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A1B0GUV1 79 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 C7orf77A4D0Y5 90 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM235A6NFC5 223 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 RBFOX3A6NFN3 312 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 TLCD2A6NGC4 264 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 LILRA5A6NI73 299 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM74A7A6NL05 159 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 DHRS7CA6NNS2 312 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 FTCDNL1E5RQL4 147 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 NPIPA5E9PKD4 350 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 H3BMH7 237 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 K7EPK0 472 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 BMPR1BO00238 502 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 WRBO00258 174 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 P2RY10O00398 339 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 UBE2CO00762 179 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 TIMM23O14925 209 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SOCS1O15524 211 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SSX5O60225 188 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 GPR137BO60478 399 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 EIF1BO60739 113 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF354AO60765 605 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 NDUFS6O75380 124 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ZFAND5O76080 213 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 MPZL1O95297 269 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SEMA4FO95754 770 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ACTL6AO96019 429 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 F10P00742 488 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 IGHV2-5P01817 119 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CLPSP04118 112 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CTSDP07339 412 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SFTPBP07988 381 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CYC1P08574 325 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 THEGLP0DJG4 465 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SPP1P10451 314 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 FOLR1P15328 257 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF44P15621 663 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 HIST1H1DP16402 221 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CTLA4P16410 223 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 GNB3P16520 340 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF17P17021 662 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF43P17038 809 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 RCC1P18754 421 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 PTNP21246 168 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CCL1P22362 96 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CPT2P23786 658 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 NFYBP25208 207 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 BLVRBP30043 206 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 HRH1P35367 487 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 DLSTP36957 453 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 RBMXP38159 391 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 RPL35P42766 123 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 OR1D4P47884 311 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 HTR5AP47898 357 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 P2RY1P47900 373 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CDX1P47902 265 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 PPM1FP49593 454 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 P2RY4P51582 365 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CCR4P51679 360 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF133P52736 654 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 EFNA3P52797 238 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 LBX1P52954 281 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SNU13P55769 128 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 MTCP1P56278 107 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CLDN15P56746 228 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CLDN6P56747 220 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM33P57088 247 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 HNRNPKP61978 463 aaKnown RBP eCLIP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SNRPEP62304 92 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CSNK2A1P68400 391 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 HIST1H3AP68431 136 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC35A1P78382 337 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 H3F3AP84243 136 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ARL16Q0P5N6 197 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 RBM39Q14498 530 aaKnown RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 MELKQ14680 651 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 GNMTQ14749 295 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 KISS1Q15726 138 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 CD226Q15762 336 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 HIST3H3Q16695 136 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 GUK1Q16774 197 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 ODF4Q2M2E3 257 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 MOGAT2Q3SYC2 334 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 LRRC37A5PQ49AS3 106 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM74A3Q4VXF1 159 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 LBHQ53QV2 105 aaPredicted RBP1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 SOHLH1Q5JUK2 328 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 DNLZQ5SXM8 178 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 HIST2H3PS2Q5TEC6 136 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM27BQ5VT28 67 aa1.75□□□□□ -2.13
SNRNP40-207ENST00000491106 AADACL3Q5VUY0 350 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms