RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ABCB10Q9NRK6 738 aa25.34■■□□□ 1.65
LDB1-204ENST00000490751 CLEC2DQ9UHP7 191 aa25.34■■□□□ 1.65
LDB1-204ENST00000490751 TCF19Q9Y242 345 aa25.34■■□□□ 1.65
LDB1-204ENST00000490751 SIRT4Q9Y6E7 314 aaPredicted RBP25.34■■□□□ 1.65
LDB1-204ENST00000490751 KIAA2026Q5HYC2 2103 aa25.34■■□□□ 1.65
LDB1-204ENST00000490751 MEGF11A6BM72 1044 aa25.33■■□□□ 1.65
LDB1-204ENST00000490751 DEGS1O15121 323 aa25.33■■□□□ 1.65
LDB1-204ENST00000490751 CSN2P05814 226 aa25.33■■□□□ 1.65
LDB1-204ENST00000490751 MINOS1Q5TGZ0 78 aa25.33■■□□□ 1.65
LDB1-204ENST00000490751 PRAMEF5Q5TYX0 476 aa25.33■■□□□ 1.65
LDB1-204ENST00000490751 TNFAIP8L1Q8WVP5 186 aa25.33■■□□□ 1.65
LDB1-204ENST00000490751 TMEM106AQ96A25 262 aa25.33■■□□□ 1.65
LDB1-204ENST00000490751 NPFFR1Q9GZQ6 430 aa25.33■■□□□ 1.65
LDB1-204ENST00000490751 BABAM2Q9NXR7 383 aa25.33■■□□□ 1.65
LDB1-204ENST00000490751 ING3Q9NXR8 418 aa25.33■■□□□ 1.65
LDB1-204ENST00000490751 MINOS1-NBL1R4GNA1 71 aa25.33■■□□□ 1.65
LDB1-204ENST00000490751 CMYA5Q8N3K9 4069 aa25.33■■□□□ 1.65
LDB1-204ENST00000490751 LALBAP00709 142 aa25.32■■□□□ 1.64
LDB1-204ENST00000490751 EFNB2P52799 333 aa25.32■■□□□ 1.64
LDB1-204ENST00000490751 ELP2Q6IA86 826 aa25.32■■□□□ 1.64
LDB1-204ENST00000490751 NDNFQ8TB73 568 aa25.32■■□□□ 1.64
LDB1-204ENST00000490751 CORO2AQ92828 525 aa25.32■■□□□ 1.64
LDB1-204ENST00000490751 SMIM19Q96E16 107 aa25.32■■□□□ 1.64
LDB1-204ENST00000490751 COQ2Q96H96 371 aa25.32■■□□□ 1.64
LDB1-204ENST00000490751 TMEM80Q96HE8 168 aa25.32■■□□□ 1.64
LDB1-204ENST00000490751 NKX3-1Q99801 234 aaPredicted RBP25.32■■□□□ 1.64
LDB1-204ENST00000490751 FAM192AQ9GZU8 254 aa25.32■■□□□ 1.64
LDB1-204ENST00000490751 TAS2R3Q9NYW6 316 aa25.32■■□□□ 1.64
LDB1-204ENST00000490751 ODAMA1E959 279 aa25.31■■□□□ 1.64
LDB1-204ENST00000490751 OGG1O15527 345 aa25.31■■□□□ 1.64
LDB1-204ENST00000490751 ATXN7L3Q14CW9 347 aaPredicted RBP25.31■■□□□ 1.64
LDB1-204ENST00000490751 KRBOX4Q5JUW0 171 aa25.31■■□□□ 1.64
LDB1-204ENST00000490751 BAIAP2L2Q6UXY1 529 aa25.31■■□□□ 1.64
LDB1-204ENST00000490751 OR2T6Q8NHC8 308 aa25.31■■□□□ 1.64
LDB1-204ENST00000490751 NR1H4Q96RI1 486 aaPredicted RBP25.31■■□□□ 1.64
LDB1-204ENST00000490751 ZNF281Q9Y2X9 895 aa25.31■■□□□ 1.64
LDB1-204ENST00000490751 HILPDAQ9Y5L2 63 aa25.31■■□□□ 1.64
LDB1-204ENST00000490751 MEGF8Q7Z7M0 2845 aa25.31■■□□□ 1.64
LDB1-204ENST00000490751 WNK1Q9H4A3 2382 aa25.3■■□□□ 1.64
LDB1-204ENST00000490751 CDK2P24941 298 aa25.3■■□□□ 1.64
LDB1-204ENST00000490751 MED21Q13503 144 aa25.3■■□□□ 1.64
LDB1-204ENST00000490751 CCBE1Q6UXH8 406 aaPredicted RBP25.3■■□□□ 1.64
LDB1-204ENST00000490751 HEPN1Q6WQI6 88 aa25.3■■□□□ 1.64
LDB1-204ENST00000490751 CHCHD3Q9NX63 227 aaKnown RBP25.3■■□□□ 1.64
LDB1-204ENST00000490751 A6NDX4 124 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 H0YJX3 145 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 JUNBP17275 347 aaPredicted RBP25.29■■□□□ 1.64
LDB1-204ENST00000490751 SLC34A1Q06495 639 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 OR52W1Q6IF63 320 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 TMEM219Q86XT9 240 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 OR4P4Q8NGL7 312 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 OR13C5Q8NGS8 318 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 OR10K1Q8NGX5 313 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 OR52N1Q8NH53 320 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 GGHQ92820 318 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 CDCA4Q9BXL8 241 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 PPIL3Q9H2H8 161 aaKnown RBP25.29■■□□□ 1.64
LDB1-204ENST00000490751 MMP27Q9H306 513 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 HSPE1-MOB4S4R3N1 261 aa25.29■■□□□ 1.64
LDB1-204ENST00000490751 HSPB6O14558 160 aa25.28■■□□□ 1.64
LDB1-204ENST00000490751 WIPF1O43516 503 aa25.28■■□□□ 1.64
LDB1-204ENST00000490751 GDNFP39905 211 aa25.28■■□□□ 1.64
LDB1-204ENST00000490751 CAPGP40121 348 aa25.28■■□□□ 1.64
LDB1-204ENST00000490751 PTGFRP43088 359 aa25.28■■□□□ 1.64
LDB1-204ENST00000490751 DYNLT3P51808 116 aa25.28■■□□□ 1.64
LDB1-204ENST00000490751 PPP3R1P63098 170 aa25.28■■□□□ 1.64
LDB1-204ENST00000490751 RSU1Q15404 277 aa25.28■■□□□ 1.64
LDB1-204ENST00000490751 C11orf88Q6PI97 169 aa25.28■■□□□ 1.64
LDB1-204ENST00000490751 ABHD12Q8N2K0 398 aa25.28■■□□□ 1.64
LDB1-204ENST00000490751 PITPNC1Q9UKF7 332 aa25.28■■□□□ 1.64
LDB1-204ENST00000490751 TET2Q6N021 2002 aaPredicted RBP25.28■■□□□ 1.64
LDB1-204ENST00000490751 FAM172BPA6NC97 362 aa25.27■■□□□ 1.64
LDB1-204ENST00000490751 F2RL2O00254 374 aa25.27■■□□□ 1.64
LDB1-204ENST00000490751 ALDOBP05062 364 aa25.27■■□□□ 1.64
LDB1-204ENST00000490751 GNAO1P09471 354 aa25.27■■□□□ 1.64
LDB1-204ENST00000490751 HTR1DP28221 377 aa25.27■■□□□ 1.64
LDB1-204ENST00000490751 OR3A4PP47883 348 aa25.27■■□□□ 1.64
LDB1-204ENST00000490751 IL13RA2Q14627 380 aa25.27■■□□□ 1.64
LDB1-204ENST00000490751 PAN3Q58A45 887 aaKnown RBP25.27■■□□□ 1.64
LDB1-204ENST00000490751 OGFRL1Q5TC84 451 aaPredicted RBP25.27■■□□□ 1.64
LDB1-204ENST00000490751 C8orf59Q8N0T1 100 aaPredicted RBP25.27■■□□□ 1.64
LDB1-204ENST00000490751 OR51T1Q8NGJ9 327 aa25.27■■□□□ 1.64
LDB1-204ENST00000490751 ORAI1Q96D31 301 aa25.27■■□□□ 1.64
LDB1-204ENST00000490751 TMEM138Q9NPI0 162 aa25.27■■□□□ 1.64
LDB1-204ENST00000490751 TSPAN15O95858 294 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 ST3GAL4Q11206 333 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 HERPUD1Q15011 391 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 PIGYQ3MUY2 71 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 DDI2Q5TDH0 399 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 DMKNQ6E0U4 476 aaPredicted RBP25.26■■□□□ 1.63
LDB1-204ENST00000490751 ASCL4Q6XD76 172 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 RTN4RL2Q86UN3 420 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 ZFP41Q8N8Y5 198 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 DTX3Q8N9I9 347 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 Q8NFD4 153 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 GHSRQ92847 366 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 ZNF702PQ9H963 129 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 OR6C3Q9NZP0 311 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 FOXJ3Q9UPW0 622 aa25.26■■□□□ 1.63
LDB1-204ENST00000490751 TRAV24A0A0B4J272 114 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms