RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 KCNIP2Q9NS61 270 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 RPH3ALQ9UNE2 315 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 MRPS18CQ9Y3D5 142 aaKnown RBP12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 PLXNA3P51805 1871 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 ATF4P18848 351 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 PRDX2P32119 198 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 CRYBA2P53672 197 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 DHODHQ02127 395 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 CEACAM21Q3KPI0 293 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 C17orf107Q6ZR85 190 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 OR2D2Q9H210 308 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 IAPPP10997 89 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 CPN1P15169 458 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 CD276Q5ZPR3 534 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 FAHD2BQ6P2I3 314 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 OR10P1Q8NGE3 313 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 FAHD2AQ96GK7 314 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 CHODLQ9H9P2 273 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 FAM212BQ9NTI7 297 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 WIPI2Q9Y4P8 454 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 CCDC168Q8NDH2 2452 aa12.48□□□□□ -0.41
ARHGEF39-205ENST00000490638 VSIG8P0DPA2 414 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 COX5BP10606 129 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 LHX2P50458 406 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 NAAAQ02083 359 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 RHEBQ15382 184 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 SLC38A6Q8IZM9 456 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 OR8G5Q8NG78 346 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 OR5AP2Q8NGF4 316 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 FAM213BQ8TBF2 198 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 SIRT4Q9Y6E7 314 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 CHD8Q9HCK8 2581 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 SSX4O60224 188 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 ZNF767PQ75MW2 155 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 MUC20Q8N307 709 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 TPRX1Q8N7U7 411 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 PECRQ9BY49 303 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 SLC25A10Q9UBX3 287 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 ZDHHC8Q9ULC8 765 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 PINLYPA6NC86 204 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 H3BP45 60 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 CA11O75493 328 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 GLRXP35754 106 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 RPS4XP62701 263 aaKnown RBP12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 AESQ08117 197 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 IGFBP7Q16270 282 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 GLRX5Q86SX6 157 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 CCDC190Q86UF4 302 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 DDOQ99489 341 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 WDR87Q6ZQQ6 2873 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 CLDN18P56856 261 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 C10orf128Q5T292 105 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 CIB3Q96Q77 187 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 OR5B12Q96R08 314 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 ABHD1Q96SE0 405 aa12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 STRAPQ9Y3F4 350 aaKnown RBP12.47□□□□□ -0.41
ARHGEF39-205ENST00000490638 F2RL2O00254 374 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 OR2F2O95006 317 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 NAT2P11245 290 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 S100PP25815 95 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 HTR2BP41595 481 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 TMEM91Q6ZNR0 172 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 TMEM45BQ96B21 275 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 POM121L2Q96KW2 1035 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 ZNF436Q9C0F3 470 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 CA10Q9NS85 328 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 ST6GALNAC2Q9UJ37 374 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 ANXA10Q9UJ72 324 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 PTPRDP23468 1912 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 SSSCA1O60232 199 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 SNAI3Q3KNW1 292 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 LINC01590Q5TEZ4 76 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 TMEM230Q96A57 120 aa12.46□□□□□ -0.41
ARHGEF39-205ENST00000490638 ZG16O60844 167 aa12.46□□□□□ -0.42
ARHGEF39-205ENST00000490638 CECR9P0C854 216 aa12.46□□□□□ -0.42
ARHGEF39-205ENST00000490638 GABRB1P18505 474 aa12.46□□□□□ -0.42
ARHGEF39-205ENST00000490638 RPS27AP62979 156 aaKnown RBP12.46□□□□□ -0.42
ARHGEF39-205ENST00000490638 TCF15Q12870 199 aa12.46□□□□□ -0.42
ARHGEF39-205ENST00000490638 FAM122BQ7Z309 247 aa12.46□□□□□ -0.42
ARHGEF39-205ENST00000490638 CCDC28AQ8IWP9 274 aa12.46□□□□□ -0.42
ARHGEF39-205ENST00000490638 MFSD4AQ8N468 514 aa12.46□□□□□ -0.42
ARHGEF39-205ENST00000490638 PRO3102Q9H379 93 aa12.46□□□□□ -0.42
ARHGEF39-205ENST00000490638 OOEPA6NGQ2 149 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 LRRC3CA6NJW4 275 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 PSMB6P28072 239 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 OPCMLQ14982 345 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 ZNF674Q2M3X9 581 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 SLC16A12Q6ZSM3 486 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 TGIF2LYQ8IUE0 185 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 TGIF2LXQ8IUE1 241 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 INSIG2Q9Y5U4 225 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 ZFP92A6NM28 416 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 E9PLN8 166 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 PYCARD-AS1I3L0S3 204 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 GYPAP02724 150 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 CLEC3BP05452 202 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 OR5G3P0C626 314 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 HNF1AP20823 631 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 IRF3Q14653 427 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms